(13 nodes) Histone H3-K14 acetylation network (Oryzias latipes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	brpf1	Uncharacterized protein. (1283 aa)
	LOC101156010	Bromodomain and PHD finger containing, 3b. (1147 aa)
	zzz3	Zinc finger, ZZ-type containing 3. (1044 aa)
	kat2a	Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily. (810 aa)
	mbip	MAP3K12 binding inhibitory protein 1. (322 aa)
	dr1	Down-regulator of transcription 1. (175 aa)
	yeats2	YEATS domain containing 2. (1430 aa)
	kat14	Lysine acetyltransferase 14. (770 aa)
	sgf29	SAGA complex associated factor 29. (290 aa)
	LOC101163229	Bromodomain containing 1b. (1167 aa)
	brd1	Bromodomain containing 1a. (1237 aa)
	LOC101156401	Bromodomain and PHD finger containing, 3a. (1229 aa)
	meaf6	MYST/Esa1-associated factor 6. (263 aa)

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101156010	LOC101156401	ENSORLP00000000437	ENSORLP00000032447	Bromodomain and PHD finger containing, 3b.	Bromodomain and PHD finger containing, 3a.	0.550
LOC101156010	LOC101163229	ENSORLP00000000437	ENSORLP00000028231	Bromodomain and PHD finger containing, 3b.	Bromodomain containing 1b.	0.789
LOC101156010	brd1	ENSORLP00000000437	ENSORLP00000029781	Bromodomain and PHD finger containing, 3b.	Bromodomain containing 1a.	0.786
LOC101156010	brpf1	ENSORLP00000000437	ENSORLP00000042555	Bromodomain and PHD finger containing, 3b.	Uncharacterized protein.	0.786
LOC101156010	meaf6	ENSORLP00000000437	ENSORLP00000045019	Bromodomain and PHD finger containing, 3b.	MYST/Esa1-associated factor 6.	0.919
LOC101156401	LOC101156010	ENSORLP00000032447	ENSORLP00000000437	Bromodomain and PHD finger containing, 3a.	Bromodomain and PHD finger containing, 3b.	0.550
LOC101156401	LOC101163229	ENSORLP00000032447	ENSORLP00000028231	Bromodomain and PHD finger containing, 3a.	Bromodomain containing 1b.	0.788
LOC101156401	brd1	ENSORLP00000032447	ENSORLP00000029781	Bromodomain and PHD finger containing, 3a.	Bromodomain containing 1a.	0.786
LOC101156401	brpf1	ENSORLP00000032447	ENSORLP00000042555	Bromodomain and PHD finger containing, 3a.	Uncharacterized protein.	0.786
LOC101156401	meaf6	ENSORLP00000032447	ENSORLP00000045019	Bromodomain and PHD finger containing, 3a.	MYST/Esa1-associated factor 6.	0.919
LOC101163229	LOC101156010	ENSORLP00000028231	ENSORLP00000000437	Bromodomain containing 1b.	Bromodomain and PHD finger containing, 3b.	0.789
LOC101163229	LOC101156401	ENSORLP00000028231	ENSORLP00000032447	Bromodomain containing 1b.	Bromodomain and PHD finger containing, 3a.	0.788
LOC101163229	brd1	ENSORLP00000028231	ENSORLP00000029781	Bromodomain containing 1b.	Bromodomain containing 1a.	0.551
LOC101163229	brpf1	ENSORLP00000028231	ENSORLP00000042555	Bromodomain containing 1b.	Uncharacterized protein.	0.581
LOC101163229	meaf6	ENSORLP00000028231	ENSORLP00000045019	Bromodomain containing 1b.	MYST/Esa1-associated factor 6.	0.909
brd1	LOC101156010	ENSORLP00000029781	ENSORLP00000000437	Bromodomain containing 1a.	Bromodomain and PHD finger containing, 3b.	0.786
brd1	LOC101156401	ENSORLP00000029781	ENSORLP00000032447	Bromodomain containing 1a.	Bromodomain and PHD finger containing, 3a.	0.786
brd1	LOC101163229	ENSORLP00000029781	ENSORLP00000028231	Bromodomain containing 1a.	Bromodomain containing 1b.	0.551
brd1	brpf1	ENSORLP00000029781	ENSORLP00000042555	Bromodomain containing 1a.	Uncharacterized protein.	0.579
brd1	meaf6	ENSORLP00000029781	ENSORLP00000045019	Bromodomain containing 1a.	MYST/Esa1-associated factor 6.	0.909