STRINGSTRING
H2L378_ORYLA H2L378_ORYLA H2L380_ORYLA H2L380_ORYLA H2L392_ORYLA H2L392_ORYLA LOC101155824 LOC101155824 H2L3A2_ORYLA H2L3A2_ORYLA H3-3B H3-3B pot1 pot1 pbrm1 pbrm1 H2L4Y1_ORYLA H2L4Y1_ORYLA H2L4Z2_ORYLA H2L4Z2_ORYLA H2L4Z9_ORYLA H2L4Z9_ORYLA H2L503_ORYLA H2L503_ORYLA ten1 ten1 LOC101170450 LOC101170450 H2L5I9_ORYLA H2L5I9_ORYLA H2L5K1_ORYLA H2L5K1_ORYLA H2L5L2_ORYLA H2L5L2_ORYLA smc1b smc1b ncapd3 ncapd3 LOC101166735 LOC101166735 H2L6B3_ORYLA H2L6B3_ORYLA H2L6K8_ORYLA H2L6K8_ORYLA H4C7 H4C7 H2L736_ORYLA H2L736_ORYLA H2L743_ORYLA H2L743_ORYLA LOC101159638 LOC101159638 H2L747_ORYLA H2L747_ORYLA SMARCE1 SMARCE1 H2LD49_ORYLA H2LD49_ORYLA vps72 vps72 LOC101173968 LOC101173968 dmap1 dmap1 ndc80 ndc80 LOC101159227 LOC101159227 rad21 rad21 cenpt cenpt ncapg ncapg H2LR68_ORYLA H2LR68_ORYLA smarcd1 smarcd1 smc1a smc1a LOC101161743 LOC101161743 LOC101162715 LOC101162715 KDM1B KDM1B LOC100301585 LOC100301585 arid2 arid2 nuf2 nuf2 ncapg2 ncapg2 phf10 phf10 H2M569_ORYLA H2M569_ORYLA bcl7b bcl7b terf2 terf2 H2M8F2_ORYLA H2M8F2_ORYLA H3-2 H3-2 HIST1H4J HIST1H4J H2M8G3_ORYLA H2M8G3_ORYLA SS18L1 SS18L1 stag1 stag1 srcap srcap LOC101169626 LOC101169626 yeats4 yeats4 ep400 ep400 LOC101173147 LOC101173147 smarca4 smarca4 smarcc1 smarcc1 ncaph ncaph LOC101170315 LOC101170315 ss18 ss18 spc25 spc25 top3b top3b LOC110014793 LOC110014793 LOC101174813 LOC101174813 H2MWV0_ORYLA H2MWV0_ORYLA H2MZJ4_ORYLA H2MZJ4_ORYLA H2N0J1_ORYLA H2N0J1_ORYLA ENSORLP00000026346 ENSORLP00000026346 LOC101172197 LOC101172197 ENSORLP00000026489 ENSORLP00000026489 LOC101163693 LOC101163693 ENSORLP00000026648 ENSORLP00000026648 ENSORLP00000026751 ENSORLP00000026751 terf2ip terf2ip ENSORLP00000026871 ENSORLP00000026871 LOC101164905 LOC101164905 LOC101172846 LOC101172846 slf1 slf1 LOC101175681 LOC101175681 smc2 smc2 LOC101162023 LOC101162023 ENSORLP00000028345 ENSORLP00000028345 ENSORLP00000028463 ENSORLP00000028463 hp1bp3 hp1bp3 ENSORLP00000028540 ENSORLP00000028540 mpnd mpnd ENSORLP00000030020 ENSORLP00000030020 ENSORLP00000030178 ENSORLP00000030178 LOC101163885 LOC101163885 LOC101155571 LOC101155571 ENSORLP00000031006 ENSORLP00000031006 ENSORLP00000031706 ENSORLP00000031706 smc3 smc3 ENSORLP00000032038 ENSORLP00000032038 LOC101155571-2 LOC101155571-2 LOC101175183 LOC101175183 LOC101156929 LOC101156929 LOC101167624 LOC101167624 ENSORLP00000032912 ENSORLP00000032912 actl6a actl6a ENSORLP00000033397 ENSORLP00000033397 spc24 spc24 ENSORLP00000033799 ENSORLP00000033799 ENSORLP00000033843 ENSORLP00000033843 ENSORLP00000034312 ENSORLP00000034312 ENSORLP00000035124 ENSORLP00000035124 terf1 terf1 ENSORLP00000035309 ENSORLP00000035309 ENSORLP00000035413 ENSORLP00000035413 stn1 stn1 ENSORLP00000035450 ENSORLP00000035450 ENSORLP00000035938 ENSORLP00000035938 bcl7a bcl7a smarcd3 smarcd3 ENSORLP00000036835 ENSORLP00000036835 LOC101155824-2 LOC101155824-2 ENSORLP00000037083 ENSORLP00000037083 LOC101155824-3 LOC101155824-3 LOC101161713 LOC101161713 rec8 rec8 LOC101161669 LOC101161669 ENSORLP00000038070 ENSORLP00000038070 mphosph8 mphosph8 shprh shprh smc4 smc4 LOC101155824-4 LOC101155824-4 LOC101173396 LOC101173396 LOC101155571-3 LOC101155571-3 LOC101158626 LOC101158626 LOC101155065 LOC101155065 ENSORLP00000040687 ENSORLP00000040687 LOC101170644 LOC101170644 mrgbp mrgbp ENSORLP00000041690 ENSORLP00000041690 ENSORLP00000041725 ENSORLP00000041725 LOC101163406 LOC101163406 ENSORLP00000041905 ENSORLP00000041905 ncaph2 ncaph2 ENSORLP00000042631 ENSORLP00000042631 trrap trrap ENSORLP00000042896 ENSORLP00000042896 Ncapd2 Ncapd2 ENSORLP00000043059 ENSORLP00000043059 dpf1 dpf1 LOC101159069 LOC101159069 Knl1 Knl1 LOC101173716 LOC101173716 ENSORLP00000043593 ENSORLP00000043593 LOC101155571-4 LOC101155571-4 ENSORLP00000044474 ENSORLP00000044474 RBM20 RBM20 ENSORLP00000045626 ENSORLP00000045626
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
H2L378_ORYLAH15 domain-containing protein. (156 aa)
H2L380_ORYLAH15 domain-containing protein. (219 aa)
H2L392_ORYLAHistone H2A; Belongs to the histone H2A family. (139 aa)
LOC101155824Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
H2L3A2_ORYLAH15 domain-containing protein. (152 aa)
H3-3BHistone H3; Belongs to the histone H3 family. (140 aa)
pot1Protection of telomeres 1 homolog. (812 aa)
pbrm1Polybromo 1. (1228 aa)
H2L4Y1_ORYLAH15 domain-containing protein. (148 aa)
H2L4Z2_ORYLAHistone H2A; Belongs to the histone H2A family. (139 aa)
H2L4Z9_ORYLAHistone H2A; Belongs to the histone H2A family. (140 aa)
H2L503_ORYLAHistone H3; Belongs to the histone H3 family. (100 aa)
ten1TEN1 subunit of CST complex. (132 aa)
LOC101170450H2A histone family, member Y; Belongs to the histone H2A family. (369 aa)
H2L5I9_ORYLAH15 domain-containing protein. (129 aa)
H2L5K1_ORYLAHistone H3; Belongs to the histone H3 family. (136 aa)
H2L5L2_ORYLAHistone H3; Belongs to the histone H3 family. (125 aa)
smc1bStructural maintenance of chromosomes protein. (1246 aa)
ncapd3Non-SMC condensin II complex, subunit D3. (1403 aa)
LOC101166735H2A histone family, member Y2. (411 aa)
H2L6B3_ORYLABromo domain-containing protein. (380 aa)
H2L6K8_ORYLAHistone H3; Belongs to the histone H3 family. (107 aa)
H4C7Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (158 aa)
H2L736_ORYLAHistone H2B; Belongs to the histone H2B family. (132 aa)
H2L743_ORYLAHistone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (99 aa)
LOC101159638Histone H3; Belongs to the histone H3 family. (136 aa)
H2L747_ORYLAHistone H2A; Belongs to the histone H2A family. (130 aa)
SMARCE1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1. (427 aa)
H2LD49_ORYLAHistone H3; Belongs to the histone H3 family. (134 aa)
vps72Vacuolar protein sorting 72 homolog a. (361 aa)
LOC101173968AT rich interactive domain 1Aa (SWI-like). (2248 aa)
dmap1DNA methyltransferase 1 associated protein 1. (484 aa)
ndc80NDC80 kinetochore complex component. (640 aa)
LOC101159227SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2. (494 aa)
rad21Uncharacterized protein. (636 aa)
cenptCENP-T_C domain-containing protein. (866 aa)
ncapgNon-SMC condensin I complex, subunit G. (1034 aa)
H2LR68_ORYLAHistone H2A; Belongs to the histone H2A family. (131 aa)
smarcd1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1. (514 aa)
smc1aStructural maintenance of chromosomes protein. (1231 aa)
LOC101161743D4, zinc and double PHD fingers family 2. (405 aa)
LOC101162715H1 histone family, member 0. (196 aa)
KDM1BLysine demethylase 1B. (829 aa)
LOC100301585Stromal antigen 2b. (1272 aa)
arid2AT rich interactive domain 2 (ARID, RFX-like). (1631 aa)
nuf2UF2 component of NDC80 kinetochore complex. (454 aa)
ncapg2Non-SMC condensin II complex, subunit G2. (1136 aa)
phf10PHD finger protein 10. (491 aa)
H2M569_ORYLASCD domain-containing protein. (120 aa)
bcl7bBAF chromatin remodeling complex subunit BCL7B b. (206 aa)
terf2HTH myb-type domain-containing protein. (627 aa)
H2M8F2_ORYLAH15 domain-containing protein. (118 aa)
H3-2Histone H3; Belongs to the histone H3 family. (139 aa)
HIST1H4JHistone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (93 aa)
H2M8G3_ORYLAHistone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (89 aa)
SS18L1SS18L1 subunit of BAF chromatin remodeling complex. (359 aa)
stag1Stromal antigen 1a. (1260 aa)
srcapSnf2-related CREBBP activator protein. (4062 aa)
LOC101169626SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family. (368 aa)
yeats4YEATS domain containing 4. (226 aa)
ep400E1A binding protein p400. (2905 aa)
LOC101173147RAD21 cohesin complex component like 1. (539 aa)
smarca4SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4a. (1621 aa)
smarcc1Uncharacterized protein. (1154 aa)
ncaphCondensin complex subunit 2; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. (691 aa)
LOC101170315Requiem_N domain-containing protein. (419 aa)
ss18SS18 subunit of BAF chromatin remodeling complex. (381 aa)
spc25SPC25 component of NDC80 kinetochore complex. (237 aa)
top3bDNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (858 aa)
LOC110014793Histone domain-containing protein. (149 aa)
LOC101174813SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1. (384 aa)
H2MWV0_ORYLAUncharacterized protein. (406 aa)
H2MZJ4_ORYLAHistone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (144 aa)
H2N0J1_ORYLASWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2. (453 aa)
ENSORLP00000026346Histone H2A; Belongs to the histone H2A family. (131 aa)
LOC101172197TERF1 (TRF1)-interacting nuclear factor 2. (566 aa)
ENSORLP00000026489Histone_H2A_C domain-containing protein; Belongs to the histone H2A family. (109 aa)
LOC101163693Histone H3.3. (136 aa)
ENSORLP00000026648Histone H2A; Belongs to the histone H2A family. (144 aa)
ENSORLP00000026751BAH domain-containing protein. (306 aa)
terf2ipUncharacterized protein. (682 aa)
ENSORLP00000026871Histone H2A; Belongs to the histone H2A family. (131 aa)
LOC101164905SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1b. (949 aa)
LOC101172846Histone H2A; Belongs to the histone H2A family. (128 aa)
slf1SMC5-SMC6 complex localization factor 1. (900 aa)
LOC101175681Enhancer of polycomb homolog. (823 aa)
smc2Structural maintenance of chromosomes protein. (1201 aa)
LOC101162023Uncharacterized protein. (1660 aa)
ENSORLP00000028345Bromo domain-containing protein. (263 aa)
ENSORLP00000028463Rad21_Rec8_N domain-containing protein. (359 aa)
hp1bp3Heterochromatin protein 1, binding protein 3. (603 aa)
ENSORLP00000028540Uncharacterized protein. (332 aa)
mpndMPN domain containing. (496 aa)
ENSORLP00000030020H15 domain-containing protein. (147 aa)
ENSORLP00000030178Uncharacterized protein. (1506 aa)
LOC101163885SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family. (373 aa)
LOC101155571Histone H2B; Belongs to the histone H2B family. (124 aa)
ENSORLP00000031006Histone H2A; Belongs to the histone H2A family. (146 aa)
ENSORLP00000031706Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (96 aa)
smc3Structural maintenance of chromosomes protein. (1216 aa)
ENSORLP00000032038Uncharacterized protein. (66 aa)
LOC101155571-2Histone H2B 1/2. (124 aa)
LOC101175183Histone H3.3. (136 aa)
LOC101156929ARID domain-containing protein. (2199 aa)
LOC101167624Si:ch211-103n10.5. (180 aa)
ENSORLP00000032912Uncharacterized protein. (72 aa)
actl6aActin-like 6A; Belongs to the actin family. (430 aa)
ENSORLP00000033397Bromo domain-containing protein. (143 aa)
spc24SPC24 component of NDC80 kinetochore complex. (199 aa)
ENSORLP00000033799Uncharacterized protein. (799 aa)
ENSORLP00000033843annotation not available (136 aa)
ENSORLP00000034312Histone H2A; Belongs to the histone H2A family. (140 aa)
ENSORLP00000035124Histone H2A; Belongs to the histone H2A family. (136 aa)
terf1Telomeric repeat-binding factor; Binds the telomeric double-stranded 5'-TTAGGG-3' repeat. (454 aa)
ENSORLP00000035309H15 domain-containing protein. (123 aa)
ENSORLP00000035413Uncharacterized protein. (108 aa)
stn1CST complex subunit STN1; Component of the CST complex proposed to act as a specialized replication factor promoting DNA replication under conditions of replication stress or natural replication barriers such as the telomere duplex. The CST complex binds single-stranded DNA with high affinity in a sequence-independent manner, while isolated subunits bind DNA with low affinity by themselves. Initially the CST complex has been proposed to protect telomeres from DNA degradation. However, the CST complex has been shown to be involved in several aspects of telomere replication. (359 aa)
ENSORLP00000035450Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (92 aa)
ENSORLP00000035938Uncharacterized protein. (521 aa)
bcl7aBAF chromatin remodeling complex subunit BCL7A. (199 aa)
smarcd3SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3b. (604 aa)
ENSORLP00000036835Uncharacterized protein. (79 aa)
LOC101155824-2Histone H4. (103 aa)
ENSORLP00000037083annotation not available (136 aa)
LOC101155824-3Histone H4. (103 aa)
LOC101161713SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2. (1581 aa)
rec8REC8 meiotic recombination protein b. (566 aa)
LOC101161669Pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1a. (427 aa)
ENSORLP00000038070Zgc:171759; Belongs to the histone H2B family. (207 aa)
mphosph8Uncharacterized protein. (867 aa)
shprhSNF2 histone linker PHD RING helicase. (1716 aa)
smc4Structural maintenance of chromosomes protein. (1296 aa)
LOC101155824-4Histone H4. (103 aa)
LOC101173396SCD domain-containing protein. (1217 aa)
LOC101155571-3Histone H2B 1/2. (124 aa)
LOC101158626Stromal antigen 2a. (1238 aa)
LOC101155065Enhancer of polycomb homolog. (966 aa)
ENSORLP00000040687Uncharacterized protein. (509 aa)
LOC101170644H2A histone family, member Va; Belongs to the histone H2A family. (316 aa)
mrgbpMRG/MORF4L binding protein. (230 aa)
ENSORLP00000041690Uncharacterized protein. (81 aa)
ENSORLP00000041725H15 domain-containing protein. (268 aa)
LOC101163406H15 domain-containing protein. (257 aa)
ENSORLP00000041905Histone H3; Belongs to the histone H3 family. (101 aa)
ncaph2Non-SMC condensin II complex, subunit H2. (610 aa)
ENSORLP00000042631Histone H2A; Belongs to the histone H2A family. (135 aa)
trrapUncharacterized protein; Belongs to the PI3/PI4-kinase family. (3817 aa)
ENSORLP00000042896annotation not available (132 aa)
Ncapd2Uncharacterized protein. (90 aa)
ENSORLP00000043059Histone H3; Belongs to the histone H3 family. (132 aa)
dpf1D4, zinc and double PHD fingers family 1. (406 aa)
LOC101159069AT rich interactive domain 1Ab (SWI-like). (2239 aa)
Knl1Uncharacterized protein. (1367 aa)
LOC101173716Uncharacterized protein. (408 aa)
ENSORLP00000043593Histone H2A; Belongs to the histone H2A family. (138 aa)
LOC101155571-4Histone H2B 1/2. (124 aa)
ENSORLP00000044474Bromo domain-containing protein. (386 aa)
RBM20RNA binding motif protein 20. (838 aa)
ENSORLP00000045626Histone H2B; Belongs to the histone H2B family. (199 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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