STRINGSTRING
LOC101158262 LOC101158262 LOC101164658 LOC101164658 H2L8C2_ORYLA H2L8C2_ORYLA CDC42 CDC42 ttc8 ttc8 cdh2 cdh2 PTK7 PTK7 LOC101174454 LOC101174454 LOC101164400 LOC101164400 LOC101165461 LOC101165461 ENSORLP00000039489 ENSORLP00000039489 LOC101163115 LOC101163115
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC101158262Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (921 aa)
LOC101164658Uncharacterized protein. (242 aa)
H2L8C2_ORYLAMyosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1125 aa)
CDC42Cell division cycle 42. (191 aa)
ttc8Tetratricopeptide repeat domain 8. (505 aa)
cdh2Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (908 aa)
PTK7Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family. (1072 aa)
LOC101174454Uncharacterized protein. (191 aa)
LOC101164400Uncharacterized protein. (191 aa)
LOC101165461Myosin IXAa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2214 aa)
ENSORLP00000039489Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (198 aa)
LOC101163115SH3-domain binding protein 1. (756 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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