STRINGSTRING
ocrl ocrl lamp2 lamp2 rab22a rab22a LOC101156599 LOC101156599 LOC101171030 LOC101171030 srgap2 srgap2 LOC111949304 LOC111949304 LOC101171261 LOC101171261 LOC101167092 LOC101167092 LOC101161334 LOC101161334 stxbp3 stxbp3 LOC101156358 LOC101156358 LOC101159467 LOC101159467 rab23 rab23 LOC101172966 LOC101172966 H2L4B7_ORYLA H2L4B7_ORYLA Mtor Mtor pik3c3 pik3c3 LOC101169108 LOC101169108 atg14 atg14 nod2 nod2 LOC101166118 LOC101166118 stx8 stx8 stxbp4 stxbp4 zyx zyx LOC101157689 LOC101157689 RAB38 RAB38 LOC105354787 LOC105354787 stx10 stx10 pikfyve pikfyve rab20 rab20 RAB9A RAB9A appl1 appl1 rab7a rab7a Vamp3 Vamp3 LOC101155381 LOC101155381 LOC101160399 LOC101160399 RAB11A RAB11A LOC101159906 LOC101159906 inpp5b inpp5b rab32 rab32 ambra1 ambra1 LOC101163128 LOC101163128 pip4p2 pip4p2 H2MBF1_ORYLA H2MBF1_ORYLA uvrag uvrag cdc42ep4 cdc42ep4 unc93b1 unc93b1 vamp7 vamp7 LOC101172996 LOC101172996 LOC101162540 LOC101162540 LOC101167870 LOC101167870 H2LQH7_ORYLA H2LQH7_ORYLA H2LPR1_ORYLA H2LPR1_ORYLA lamp1 lamp1 LOC101171270 LOC101171270 LOC101174929 LOC101174929 RAB31 RAB31 nod1 nod1 appl2 appl2 LOC101162959 LOC101162959
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ocrlOCRL inositol polyphosphate-5-phosphatase. (971 aa)
lamp2Lysosomal-associated membrane protein 2. (486 aa)
rab22aRAB22A, member RAS oncogene family. (194 aa)
LOC101156599RAB38c, member of RAS oncogene family. (225 aa)
LOC101171030RAB11a, member RAS oncogene family, like. (216 aa)
srgap2SLIT-ROBO Rho GTPase activating protein 2. (1117 aa)
LOC111949304Zgc:162171. (226 aa)
LOC101171261Si:ch73-234b20.5. (103 aa)
LOC101167092Uncharacterized protein. (215 aa)
LOC101161334Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P). (296 aa)
stxbp3Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (598 aa)
LOC101156358Uncharacterized protein. (234 aa)
LOC101159467Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P). (263 aa)
rab23RAB23, member RAS oncogene family. (235 aa)
LOC101172966Syntaxin 6; Belongs to the syntaxin family. (249 aa)
H2L4B7_ORYLAMechanistic target of rapamycin kinase; Belongs to the PI3/PI4-kinase family. (737 aa)
MtorSerine/threonine-protein kinase TOR. (1023 aa)
pik3c3Phosphatidylinositol 3-kinase catalytic subunit type 3. (884 aa)
LOC101169108Synaptotagmin VIIa. (742 aa)
atg14Autophagy related 14. (576 aa)
nod2Nucleotide-binding oligomerization domain containing 2. (978 aa)
LOC101166118Synaptotagmin VIIb. (671 aa)
stx8Syntaxin 8. (238 aa)
stxbp4Syntaxin binding protein 4. (702 aa)
zyxUncharacterized protein. (625 aa)
LOC101157689RAB7a, member RAS oncogene family. (206 aa)
RAB38RAB38, member RAS oncogene family. (307 aa)
LOC105354787Vesicle-associated membrane protein 8 (endobrevin). (120 aa)
stx10Syntaxin 10. (247 aa)
pikfyvePhosphoinositide kinase, FYVE finger containing. (2070 aa)
rab20RAB20, member RAS oncogene family. (262 aa)
RAB9ARAB9A, member RAS oncogene family. (201 aa)
appl1Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1. (663 aa)
rab7aUncharacterized protein. (207 aa)
Vamp3Vesicle-associated membrane protein 3 (cellubrevin). (99 aa)
LOC101155381Toll-like receptor 18. (873 aa)
LOC101160399RAB11B, member RAS oncogene family, a. (218 aa)
RAB11ARAB11A, member RAS oncogene family. (217 aa)
LOC101159906RAB11B, member RAS oncogene family, b. (301 aa)
inpp5bInositol polyphosphate-5-phosphatase B. (899 aa)
rab32RAB32a, member RAS oncogene family. (213 aa)
ambra1Autophagy/beclin-1 regulator 1b. (1376 aa)
LOC101163128TIR domain-containing protein; Belongs to the Toll-like receptor family. (826 aa)
pip4p2Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P). (301 aa)
H2MBF1_ORYLALysosomal associated membrane protein 1b. (235 aa)
uvragUV radiation resistance associated gene. (719 aa)
cdc42ep4CDC42 effector protein (Rho GTPase binding) 4b. (332 aa)
unc93b1Unc-93 homolog B1, TLR signaling regulator. (625 aa)
vamp7Synaptobrevin-like 1; Belongs to the synaptobrevin family. (220 aa)
LOC101172996Rab interacting lysosomal protein. (423 aa)
LOC101162540RAB14, member RAS oncogene family. (215 aa)
LOC101167870CDC42 effector protein (Rho GTPase binding) 4a. (345 aa)
H2LQH7_ORYLARAB9A, member RAS oncogene family. (210 aa)
H2LPR1_ORYLARAB9B, member RAS oncogene family. (210 aa)
lamp1Lysosomal associated membrane protein 1a. (420 aa)
LOC101171270RAB38b, member of RAS oncogene family. (218 aa)
LOC101174929Toll-like receptor 1; Belongs to the Toll-like receptor family. (795 aa)
RAB31RAB31, member RAS oncogene family. (237 aa)
nod1Nucleotide-binding oligomerization domain containing 1. (938 aa)
appl2Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2. (666 aa)
LOC101162959TIR domain-containing protein. (831 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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