STRINGSTRING
sash3 sash3 LOC101157631 LOC101157631 nfkbid nfkbid lef1 lef1 ripk2 ripk2 dusp10 dusp10 hlx hlx H2ME57_ORYLA H2ME57_ORYLA ambra1 ambra1 cd83 cd83 zbtb1 zbtb1 myb myb gata3 gata3 xbp1 xbp1 LOC101170171 LOC101170171 bad bad LOC101160820 LOC101160820 ENSORLP00000030535 ENSORLP00000030535 SART1 SART1 LOC101166327 LOC101166327 ptprc ptprc syk syk LOC101158686 LOC101158686 LOC101158194 LOC101158194 LOC101162039 LOC101162039 TGFBR2 TGFBR2 socs1 socs1 cbfb cbfb LOC101171170 LOC101171170 ENSORLP00000045949 ENSORLP00000045949 H2L4N6_ORYLA H2L4N6_ORYLA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
sash3SAM and SH3 domain containing 3. (391 aa)
LOC101157631Transforming growth factor beta; Belongs to the TGF-beta family. (444 aa)
nfkbidANK_REP_REGION domain-containing protein. (453 aa)
lef1Lymphoid enhancer-binding factor 1. (379 aa)
ripk2Receptor-interacting serine-threonine kinase 2. (590 aa)
dusp10Dual specificity phosphatase 10; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (472 aa)
hlxH2.0-like homeo box 1 (Drosophila). (387 aa)
H2ME57_ORYLAV-set immunoregulatory receptor. (288 aa)
ambra1Autophagy/beclin-1 regulator 1b. (1376 aa)
cd83Ig-like domain-containing protein. (223 aa)
zbtb1Zinc finger and BTB domain containing 1. (684 aa)
mybUncharacterized protein. (592 aa)
gata3Uncharacterized protein. (440 aa)
xbp1X-box binding protein 1. (259 aa)
LOC101170171Zeta chain of T cell receptor associated protein kinase 70. (668 aa)
badBCL2 associated agonist of cell death b. (164 aa)
LOC101160820SCY domain-containing protein. (131 aa)
ENSORLP00000030535Fibronectin type-III domain-containing protein. (383 aa)
SART1Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP. (763 aa)
LOC101166327Si:dkey-175m17.7. (881 aa)
ptprcProtein tyrosine phosphatase receptor type C. (1343 aa)
sykTyrosine-protein kinase. (624 aa)
LOC101158686MALT paracaspase 2. (843 aa)
LOC101158194MALT paracaspase 3. (557 aa)
LOC101162039KRAP_IP3R_bind domain-containing protein. (667 aa)
TGFBR2Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (540 aa)
socs1Suppressor of cytokine signaling 1. (199 aa)
cbfbCore-binding factor subunit beta. (188 aa)
LOC101171170MALT paracaspase 1. (811 aa)
ENSORLP00000045949Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta. (274 aa)
H2L4N6_ORYLAUncharacterized protein. (780 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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