STRINGSTRING
ormdl1 ormdl1 LOC101161673 LOC101161673 sirt1 sirt1 LOC101165149 LOC101165149 dax1 dax1 LOC101172593 LOC101172593 LOC101171139 LOC101171139 sorl1 sorl1 pdgfa pdgfa LOC105356557 LOC105356557 LOC101157602 LOC101157602 fgf19 fgf19 prmt3 prmt3 LOC101159391 LOC101159391 brca1 brca1 pibf1 pibf1 LOC101165396 LOC101165396 pik3ip1 pik3ip1 LOC101167075 LOC101167075 ENSORLP00000042504 ENSORLP00000042504 pip4k2a pip4k2a LOC101155940 LOC101155940 LOC101169209 LOC101169209 LOC111946406 LOC111946406 fmc1 fmc1 PIP4K2B PIP4K2B LOC101170232 LOC101170232 LOC101166399 LOC101166399 snai2 snai2 LOC101166126 LOC101166126 etfbkmt etfbkmt LOC101161051 LOC101161051 LOC101173704 LOC101173704 LOC101170718 LOC101170718 wdtc1 wdtc1 ccdc3 ccdc3 pdgfb pdgfb sirt4 sirt4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ormdl1ORM1-like protein; Negative regulator of sphingolipid synthesis. (153 aa)
LOC101161673Apolipoprotein Eb. (265 aa)
sirt1Deacetylase sirtuin-type domain-containing protein. (680 aa)
LOC101165149Platelet-derived growth factor beta polypeptide b; Belongs to the PDGF/VEGF growth factor family. (510 aa)
dax1NR LBD domain-containing protein. (287 aa)
LOC101172593Tumor necrosis factor a (TNF superfamily, member 2). (279 aa)
LOC101171139Platelet-derived growth factor alpha polypeptide a; Belongs to the PDGF/VEGF growth factor family. (199 aa)
sorl1Sortilin-related receptor, L(DLR class) A repeats containing. (2051 aa)
pdgfaPlatelet-derived growth factor alpha polypeptide b; Belongs to the PDGF/VEGF growth factor family. (227 aa)
LOC105356557G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (393 aa)
LOC101157602Dickkopf WNT signaling pathway inhibitor 3a. (266 aa)
fgf19Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (208 aa)
prmt3Protein arginine methyltransferase 3; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (524 aa)
LOC101159391Cell death inducing DFFA like effector a. (214 aa)
brca1Uncharacterized protein. (1292 aa)
pibf1Progesterone immunomodulatory binding factor 1. (749 aa)
LOC101165396Solute carrier family 27 member 1a. (648 aa)
pik3ip1Phosphoinositide-3-kinase interacting protein 1. (300 aa)
LOC101167075Apolipoprotein Da, duplicate 1; Belongs to the calycin superfamily. Lipocalin family. (186 aa)
ENSORLP00000042504Dickkopf WNT signaling pathway inhibitor 3b. (307 aa)
pip4k2aPhosphatidylinositol-5-phosphate 4-kinase, type II, alpha a. (443 aa)
LOC101155940BSCL2 lipid droplet biogenesis associated, seipin, like. (365 aa)
LOC101169209Uncharacterized protein. (283 aa)
LOC111946406ORM1-like protein; Negative regulator of sphingolipid synthesis. (153 aa)
fmc1Si:ch1073-314i13.4. (110 aa)
PIP4K2BPhosphatidylinositol-5-phosphate 4-kinase type 2 beta. (412 aa)
LOC101170232Apolipoprotein Db; Belongs to the calycin superfamily. Lipocalin family. (195 aa)
LOC101166399Apolipoprotein Ea. (262 aa)
snai2Snail family zinc finger 2. (260 aa)
LOC101166126BSCL2 lipid droplet biogenesis associated, seipin. (394 aa)
etfbkmtElectron transfer flavoprotein subunit beta lysine methyltransferase. (335 aa)
LOC101161051Coiled-coil domain containing 3b. (273 aa)
LOC101173704ORM1-like protein; Negative regulator of sphingolipid synthesis. (153 aa)
LOC101170718Apolipoprotein Db; Belongs to the calycin superfamily. Lipocalin family. (232 aa)
wdtc1WD and tetratricopeptide repeats 1. (674 aa)
ccdc3Coiled-coil domain containing 3a. (296 aa)
pdgfbPlatelet-derived growth factor beta polypeptide a; Belongs to the PDGF/VEGF growth factor family. (553 aa)
sirt4NAD-dependent protein deacylase; NAD-dependent protein deacylase. Catalyzes the NAD-dependent hydrolysis of acyl groups from lysine residues; Belongs to the sirtuin family. Class II subfamily. (311 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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