STRINGSTRING
sema4c sema4c SEMA4G SEMA4G serpine2 serpine2 LOC101166143 LOC101166143 LOC105357487 LOC105357487 igfbp2 igfbp2 ENSORLP00000043858 ENSORLP00000043858 sema3d sema3d LOC101160344 LOC101160344 LOC101163504 LOC101163504 slit1 slit1 LOC101163572 LOC101163572 ENSORLP00000045924 ENSORLP00000045924 sfrp2 sfrp2 epha4 epha4 sav1 sav1 LOC100049217 LOC100049217 RERG RERG sema3e sema3e lgmn lgmn ppt1 ppt1 LOC101154988 LOC101154988 ulk1 ulk1 LOC101171428 LOC101171428 flcn flcn H2M6Y0_ORYLA H2M6Y0_ORYLA LOC101172901 LOC101172901 sema4g sema4g Dcbld2 Dcbld2 wnt3 wnt3 dusp10 dusp10 ing4 ing4 wt1 wt1 wnt11 wnt11 sirt1 sirt1 sh3bp4 sh3bp4 LOC101167046 LOC101167046 slc6a4 slc6a4 LOC101169699 LOC101169699 LOC101154818 LOC101154818 LOC101160266 LOC101160266 LOC101164044 LOC101164044 LOC101169812 LOC101169812 LOC101170303 LOC101170303 LOC100049292 LOC100049292 LOC101161968 LOC101161968 stk11 stk11 cgrrf1 cgrrf1 NDUFA13 NDUFA13 smarca4 smarca4 bmp10 bmp10 tomm70 tomm70 dip2a dip2a LOC101173050 LOC101173050 MINAR1 MINAR1 msx1 msx1 bcl2 bcl2 LOC105356063 LOC105356063 cdk5 cdk5 LOC101174487 LOC101174487 crlf3 crlf3 ryk ryk ip6k2 ip6k2 LOC101157631 LOC101157631 ing5 ing5 FHL1 FHL1 LOC101155872 LOC101155872 H2L8Z5_ORYLA H2L8Z5_ORYLA Ankrd26 Ankrd26 LOC101157923 LOC101157923 LOC101155037 LOC101155037 LOC105356645 LOC105356645 DCSTAMP DCSTAMP dab2 dab2 H2LCR5_ORYLA H2LCR5_ORYLA bmpr2 bmpr2 phb phb LOC101167573 LOC101167573 gsk3b gsk3b ndufs3 ndufs3 LOC101164782 LOC101164782 LOC101162194 LOC101162194 LOC101164124 LOC101164124 LOC101160235 LOC101160235 sema3g sema3g sema6a sema6a cdkn2d cdkn2d LOC101169630 LOC101169630 MYOZ1 MYOZ1 PNPT1 PNPT1 Adrb1 Adrb1 SMAD4 SMAD4 SEMA4D SEMA4D SEMA4F SEMA4F dip2c dip2c LOC101155173 LOC101155173 LOC101168720 LOC101168720 LOC101166070 LOC101166070 LOC101160135 LOC101160135 mul1 mul1 ifrd1 ifrd1 vgll4 vgll4 LOC101159406 LOC101159406 SERTAD2 SERTAD2 ENSORLP00000028045 ENSORLP00000028045 LOC101162023 LOC101162023 cda cda gdf11 gdf11 LOC101167651 LOC101167651 mstn mstn nme6 nme6 LOC101156117 LOC101156117 ENSORLP00000029587 ENSORLP00000029587 LOC101173916 LOC101173916 st7 st7 slit2 slit2 sema6d sema6d LOC101167868 LOC101167868 LOC101169382 LOC101169382 LOC101160329 LOC101160329 LOC101159436 LOC101159436 LOC101171477 LOC101171477 LOC101155634 LOC101155634 LOC101156825 LOC101156825 sema7a sema7a LOC101170279 LOC101170279 LOC101166949 LOC101166949 LOC101170687 LOC101170687 LOC101166327 LOC101166327 wnt3a wnt3a cdkn2c cdkn2c dcun1d3 dcun1d3 LOC101163245 LOC101163245 LOC101155128 LOC101155128 rb1 rb1 LOC101160158 LOC101160158 LOC101167323 LOC101167323 LOC101166872 LOC101166872 ctdp1 ctdp1 LOC101161713 LOC101161713 sema3a sema3a LOC101166116 LOC101166116 rtn4r rtn4r sema5b sema5b wt1-2 wt1-2 CCN3 CCN3 sema3c sema3c ENSORLP00000039626 ENSORLP00000039626 blvrb blvrb LOC101171739 LOC101171739 sema3b sema3b LOC101160680 LOC101160680 LOC101174516 LOC101174516 Plac8 Plac8 LOC101157715 LOC101157715 LOC101155067 LOC101155067 sema5a sema5a LOC101168033 LOC101168033 ENSORLP00000042330 ENSORLP00000042330
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
sema4cUncharacterized protein; Belongs to the semaphorin family. (864 aa)
SEMA4GSemaphorin 4G; Belongs to the semaphorin family. (905 aa)
serpine2Serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2; Belongs to the serpin family. (494 aa)
LOC101166143Growth differentiation factor 9. (435 aa)
LOC105357487Activin_recp domain-containing protein. (762 aa)
igfbp2Insulin-like growth factor binding protein 2a. (286 aa)
ENSORLP00000043858Si:ch211-272n13.3. (250 aa)
sema3dSema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D; Belongs to the semaphorin family. (792 aa)
LOC101160344Glycogen synthase kinase 3 alpha b; Belongs to the protein kinase superfamily. (480 aa)
LOC101163504Mothers against decapentaplegic homolog. (528 aa)
slit1Slit homolog 1a (Drosophila). (1534 aa)
LOC101163572Disco-interacting protein 2 homolog Ba. (1589 aa)
ENSORLP00000045924Uncharacterized protein. (220 aa)
sfrp2Secreted frizzled-related protein 2. (290 aa)
epha4Eph receptor A4, like. (990 aa)
sav1Salvador family WW domain containing protein 1. (391 aa)
LOC100049217Muscle segment homeobox 3. (250 aa)
RERGRAS like estrogen regulated growth inhibitor. (124 aa)
sema3eSema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E; Belongs to the semaphorin family. (791 aa)
lgmnLegumain. (434 aa)
ppt1Palmitoyl-protein thioesterase 1 (ceroid-lipofuscinosis, neuronal 1, infantile). (304 aa)
LOC101154988ELL associated factor 2. (264 aa)
ulk1Unc-51 like autophagy activating kinase 1. (1020 aa)
LOC101171428FZ domain-containing protein. (337 aa)
flcnFolliculin. (558 aa)
H2M6Y0_ORYLAAdrenoceptor beta 3a; Belongs to the G-protein coupled receptor 1 family. (419 aa)
LOC101172901Vestigial-like family member 4a. (261 aa)
sema4gUncharacterized protein; Belongs to the semaphorin family. (884 aa)
Dcbld2CUB domain-containing protein. (236 aa)
wnt3Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (355 aa)
dusp10Dual specificity phosphatase 10; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (472 aa)
ing4Inhibitor of growth protein. (249 aa)
wt1Uncharacterized protein. (435 aa)
wnt11Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (355 aa)
sirt1Deacetylase sirtuin-type domain-containing protein. (680 aa)
sh3bp4SH3-domain binding protein 4. (963 aa)
LOC101167046Unc-51 like autophagy activating kinase 1a. (916 aa)
slc6a4Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (671 aa)
LOC101169699Testis specific protein Y-linked; Belongs to the nucleosome assembly protein (NAP) family. (573 aa)
LOC101154818Insulin-like growth factor binding protein 2b. (264 aa)
LOC101160266Uncharacterized protein. (1078 aa)
LOC101164044Uncharacterized protein; Belongs to the semaphorin family. (665 aa)
LOC101169812Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6Ba; Belongs to the semaphorin family. (901 aa)
LOC101170303Semaphorin 4e; Belongs to the semaphorin family. (768 aa)
LOC100049292Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Aa; Belongs to the semaphorin family. (859 aa)
LOC101161968Si:ch211-129c21.1; Belongs to the semaphorin family. (803 aa)
stk11Serine/threonine kinase 11; Belongs to the protein kinase superfamily. (438 aa)
cgrrf1Cell growth regulator with ring finger domain 1. (314 aa)
NDUFA13NADH:ubiquinone oxidoreductase subunit A13. (144 aa)
smarca4SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4a. (1621 aa)
bmp10Bone morphogenetic protein 10. (488 aa)
tomm70Translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae). (577 aa)
dip2aDisco-interacting protein 2 homolog A. (1494 aa)
LOC101173050Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6Bb; Belongs to the semaphorin family. (882 aa)
MINAR1Membrane integral NOTCH2 associated receptor 1. (801 aa)
msx1Muscle segment homeobox 1a. (275 aa)
bcl2BCL2 apoptosis regulator b. (202 aa)
LOC105356063Uncharacterized protein; Belongs to the semaphorin family. (764 aa)
cdk5Cyclin-dependent kinase 5; Belongs to the protein kinase superfamily. (292 aa)
LOC101174487SH3-domain binding protein 4a. (932 aa)
crlf3Cytokine receptor-like factor 3. (444 aa)
rykReceptor like tyrosine kinase. (642 aa)
ip6k2Kinase; Belongs to the inositol phosphokinase (IPK) family. (437 aa)
LOC101157631Transforming growth factor beta; Belongs to the TGF-beta family. (444 aa)
ing5Inhibitor of growth protein. (241 aa)
FHL1Four and a half LIM domains 1. (297 aa)
LOC101155872Four and a half LIM domains 1b. (329 aa)
H2L8Z5_ORYLADUF3496 domain-containing protein. (481 aa)
Ankrd26CCDC144C domain-containing protein. (283 aa)
LOC101157923Insulin-like growth factor binding protein 5a. (253 aa)
LOC101155037Transforming growth factor beta; Belongs to the TGF-beta family. (420 aa)
LOC105356645Disco interacting protein 2 homolog C. (1599 aa)
DCSTAMPDendrocyte expressed seven transmembrane protein. (479 aa)
dab2DAB adaptor protein 2. (761 aa)
H2LCR5_ORYLAGrowth arrest-specific 1b. (236 aa)
bmpr2Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (1056 aa)
phbProhibitin. (299 aa)
LOC101167573Apolipoprotein Da, duplicate 2; Belongs to the calycin superfamily. Lipocalin family. (184 aa)
gsk3bGlycogen synthase kinase 3 beta, genome duplicate a. (216 aa)
ndufs3NADH:ubiquinone oxidoreductase core subunit S3; Belongs to the complex I 30 kDa subunit family. (294 aa)
LOC101164782SCP domain-containing protein; Belongs to the CRISP family. (358 aa)
LOC101162194Disco-interacting protein 2 homolog Bb. (1325 aa)
LOC101164124Suppressor of cytokine signaling 2. (197 aa)
LOC101160235Interferon-related developmental regulator 2. (480 aa)
sema3gSema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3bl; Belongs to the semaphorin family. (776 aa)
sema6aSema domain-containing protein; Belongs to the semaphorin family. (1023 aa)
cdkn2dCyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4). (164 aa)
LOC101169630Spartin a. (636 aa)
MYOZ1Myozenin 1. (315 aa)
PNPT1Polyribonucleotide nucleotidyltransferase 1. (796 aa)
Adrb1Adrenoceptor beta 1. (403 aa)
SMAD4Mothers against decapentaplegic homolog. (510 aa)
SEMA4DSemaphorin 4D; Belongs to the semaphorin family. (903 aa)
SEMA4FSsemaphorin 4F; Belongs to the semaphorin family. (841 aa)
dip2cDisco interacting protein 2 homolog C. (1355 aa)
LOC101155173Sema domain-containing protein. (1089 aa)
LOC101168720Glycogen synthase kinase 3 alpha a; Belongs to the protein kinase superfamily. (438 aa)
LOC101166070Uncharacterized protein; Belongs to the peptidase S1 family. (459 aa)
LOC101160135Disco-interacting protein 2 homolog A. (610 aa)
mul1Mitochondrial E3 ubiquitin protein ligase 1b. (382 aa)
ifrd1Interferon-related developmental regulator 1. (428 aa)
vgll4Vestigial-like family member 4b. (309 aa)
LOC101159406Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa; Belongs to the semaphorin family. (789 aa)
SERTAD2SERTA domain containing 2b. (416 aa)
ENSORLP00000028045Si:dkey-177p2.6. (252 aa)
LOC101162023Uncharacterized protein. (1660 aa)
cdaCytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. (189 aa)
gdf11Growth differentiation factor 11. (389 aa)
LOC101167651Mitochondrial E3 ubiquitin protein ligase 1a. (376 aa)
mstnTGF_BETA_2 domain-containing protein. (424 aa)
nme6Nucleoside diphosphate kinase. (184 aa)
LOC101156117Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E; Belongs to the semaphorin family. (1085 aa)
ENSORLP00000029587F5/8 type C domain-containing protein. (181 aa)
LOC101173916Mothers against decapentaplegic homolog. (538 aa)
st7Suppression of tumorigenicity 7. (535 aa)
slit2Slit homolog 2 (Drosophila). (1576 aa)
sema6dSema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D, like; Belongs to the semaphorin family. (1103 aa)
LOC101167868Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3H; Belongs to the semaphorin family. (759 aa)
LOC101169382Spartin a. (553 aa)
LOC101160329Sema domain-containing protein; Belongs to the semaphorin family. (1157 aa)
LOC101159436Sema domain-containing protein; Belongs to the semaphorin family. (832 aa)
LOC101171477Uncharacterized protein; Belongs to the semaphorin family. (638 aa)
LOC101155634Si:ch211-113g11.6; Belongs to the semaphorin family. (637 aa)
LOC101156825Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (579 aa)
sema7aSemaphorin 7A; Belongs to the semaphorin family. (525 aa)
LOC101170279Adrenoceptor beta 2, surface a. (415 aa)
LOC101166949Sema domain-containing protein; Belongs to the semaphorin family. (837 aa)
LOC101170687Slit homolog 3 (Drosophila). (1538 aa)
LOC101166327Si:dkey-175m17.7. (881 aa)
wnt3aProtein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (355 aa)
cdkn2cCyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4). (168 aa)
dcun1d3DCN1-like protein. (325 aa)
LOC101163245Kinase; Belongs to the inositol phosphokinase (IPK) family. (472 aa)
LOC101155128Spartin b. (598 aa)
rb1Retinoblastoma 1. (916 aa)
LOC101160158Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fb; Belongs to the semaphorin family. (796 aa)
LOC101167323Apolipoprotein Da, duplicate 2; Belongs to the calycin superfamily. Lipocalin family. (252 aa)
LOC101166872Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ga; Belongs to the semaphorin family. (742 aa)
ctdp1CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1. (1041 aa)
LOC101161713SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2. (1581 aa)
sema3aSema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ab; Belongs to the semaphorin family. (796 aa)
LOC101166116CDKN2A interacting protein. (323 aa)
rtn4rReticulon 4 receptor. (488 aa)
sema5bSema domain-containing protein. (1139 aa)
wt1-2Uncharacterized protein. (418 aa)
CCN3Cellular communication network factor 3. (366 aa)
sema3cSema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C; Belongs to the semaphorin family. (763 aa)
ENSORLP00000039626Frataxin. (185 aa)
blvrbSERTA domain-containing protein. (316 aa)
LOC101171739Si:dkey-49n23.1; Belongs to the semaphorin family. (808 aa)
sema3bSema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B; Belongs to the semaphorin family. (805 aa)
LOC101160680Unc-51 like autophagy activating kinase 2. (1031 aa)
LOC101174516Sema domain-containing protein; Belongs to the semaphorin family. (772 aa)
Plac8Placenta associated 8, tandem duplicate 1. (96 aa)
LOC101157715Bone morphogenetic protein 10, like. (441 aa)
LOC101155067Insulin-like growth factor binding protein 5a. (266 aa)
sema5aSema domain-containing protein. (1078 aa)
LOC101168033Suppression of tumorigenicity 7 like. (540 aa)
ENSORLP00000042330Uncharacterized protein. (240 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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