STRINGSTRING
cln3 cln3 ptgs2 ptgs2 LOC101169555 LOC101169555 LOC101163191 LOC101163191 mlc1 mlc1 bad bad BDKRB2 BDKRB2 efhd2 efhd2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
cln3Battenin. (437 aa)
ptgs2EGF-like domain-containing protein. (607 aa)
LOC101169555Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (596 aa)
LOC101163191EF-hand domain family, member D1. (231 aa)
mlc1Modulator of VRAC current 1. (393 aa)
badBCL2 associated agonist of cell death b. (164 aa)
BDKRB2Bradykinin receptor B2; Belongs to the G-protein coupled receptor 1 family. (351 aa)
efhd2EF-hand domain family, member D2. (233 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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