STRINGSTRING
LOC101162532 LOC101162532 nodal nodal cdh2 cdh2 foxh1 foxh1 LOC101158262 LOC101158262
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC101162532Southpaw. (413 aa)
nodalNodal-related 2. (381 aa)
cdh2Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (908 aa)
foxh1Forkhead box H1. (511 aa)
LOC101158262Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (921 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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