(15 nodes) Cytoskeleton of presynaptic active zone network (Oryzias latipes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RIMS2	Regulating synaptic membrane exocytosis 2. (1283 aa)
	ENSORLP00000026521	Uncharacterized protein. (877 aa)
	LOC101167118	Uncharacterized protein. (4117 aa)
	erc1	ELKS/RAB6-interacting/CAST family member 1a. (1132 aa)
	ENSORLP00000031636	C2 domain-containing protein. (317 aa)
	erc2	ELKS/RAB6-interacting/CAST family member 2. (1145 aa)
	ENSORLP00000034554	C2 domain-containing protein. (288 aa)
	ERC2	Uncharacterized protein. (1111 aa)
	LOC101162174	ELKS/RAB6-interacting/CAST family member 1. (1172 aa)
	PCLO	Piccolo presynaptic cytomatrix protein b. (7617 aa)
	LOC101156568	Bassoon (presynaptic cytomatrix protein) b. (3697 aa)
	LOC101174515	Regulating synaptic membrane exocytosis 3. (323 aa)
	H2LBE3_ORYLA	C2 domain-containing protein. (313 aa)
	H2L8K4_ORYLA	Regulating synaptic membrane exocytosis 1a. (870 aa)
	LOC101155978	Piccolo presynaptic cytomatrix protein a. (3918 aa)

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSORLP00000026521	ENSORLP00000031636	ENSORLP00000026521	ENSORLP00000031636	Uncharacterized protein.	C2 domain-containing protein.	0.909
ENSORLP00000026521	ENSORLP00000034554	ENSORLP00000026521	ENSORLP00000034554	Uncharacterized protein.	C2 domain-containing protein.	0.914
ENSORLP00000026521	ERC2	ENSORLP00000026521	ENSORLP00000035459	Uncharacterized protein.	Uncharacterized protein.	0.782
ENSORLP00000026521	H2LBE3_ORYLA	ENSORLP00000026521	ENSORLP00000003215	Uncharacterized protein.	C2 domain-containing protein.	0.909
ENSORLP00000026521	LOC101162174	ENSORLP00000026521	ENSORLP00000037632	Uncharacterized protein.	ELKS/RAB6-interacting/CAST family member 1.	0.782
ENSORLP00000026521	LOC101174515	ENSORLP00000026521	ENSORLP00000006562	Uncharacterized protein.	Regulating synaptic membrane exocytosis 3.	0.909
ENSORLP00000026521	erc1	ENSORLP00000026521	ENSORLP00000029712	Uncharacterized protein.	ELKS/RAB6-interacting/CAST family member 1a.	0.782
ENSORLP00000026521	erc2	ENSORLP00000026521	ENSORLP00000033855	Uncharacterized protein.	ELKS/RAB6-interacting/CAST family member 2.	0.782
ENSORLP00000031636	ENSORLP00000026521	ENSORLP00000031636	ENSORLP00000026521	C2 domain-containing protein.	Uncharacterized protein.	0.909
ENSORLP00000031636	ERC2	ENSORLP00000031636	ENSORLP00000035459	C2 domain-containing protein.	Uncharacterized protein.	0.403
ENSORLP00000031636	H2L8K4_ORYLA	ENSORLP00000031636	ENSORLP00000002178	C2 domain-containing protein.	Regulating synaptic membrane exocytosis 1a.	0.899
ENSORLP00000031636	erc2	ENSORLP00000031636	ENSORLP00000033855	C2 domain-containing protein.	ELKS/RAB6-interacting/CAST family member 2.	0.403
ENSORLP00000034554	ENSORLP00000026521	ENSORLP00000034554	ENSORLP00000026521	C2 domain-containing protein.	Uncharacterized protein.	0.914
ENSORLP00000034554	ERC2	ENSORLP00000034554	ENSORLP00000035459	C2 domain-containing protein.	Uncharacterized protein.	0.782
ENSORLP00000034554	H2L8K4_ORYLA	ENSORLP00000034554	ENSORLP00000002178	C2 domain-containing protein.	Regulating synaptic membrane exocytosis 1a.	0.740
ENSORLP00000034554	LOC101162174	ENSORLP00000034554	ENSORLP00000037632	C2 domain-containing protein.	ELKS/RAB6-interacting/CAST family member 1.	0.782
ENSORLP00000034554	erc1	ENSORLP00000034554	ENSORLP00000029712	C2 domain-containing protein.	ELKS/RAB6-interacting/CAST family member 1a.	0.782
ENSORLP00000034554	erc2	ENSORLP00000034554	ENSORLP00000033855	C2 domain-containing protein.	ELKS/RAB6-interacting/CAST family member 2.	0.782
ERC2	ENSORLP00000026521	ENSORLP00000035459	ENSORLP00000026521	Uncharacterized protein.	Uncharacterized protein.	0.782
ERC2	ENSORLP00000031636	ENSORLP00000035459	ENSORLP00000031636	Uncharacterized protein.	C2 domain-containing protein.	0.403