(25 nodes) Regulation of catecholamine secretion network (Oryzias latipes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	syt12	Synaptotagmin XII. (429 aa)
	LOC101156534	Synaptotagmin Vb. (447 aa)
	LOC101162836	Synaptotagmin Ib. (407 aa)
	LOC101171486	Synaptotagmin IXb. (527 aa)
	pink1	PTEN induced kinase 1. (577 aa)
	chga	Uncharacterized protein. (315 aa)
	LOC101164943	Synaptotagmin XV. (429 aa)
	LOC101157206	Uncharacterized protein. (430 aa)
	snca	Uncharacterized protein; Belongs to the synuclein family. (152 aa)
	syt1	Synaptotagmin Ia. (536 aa)
	ENSORLP00000029575	Synaptotagmin VIa. (547 aa)
	LOC101166118	Synaptotagmin VIIb. (671 aa)
	vip	Vasoactive intestinal peptide. (180 aa)
	syt3	Synaptotagmin III. (561 aa)
	LOC101169108	Synaptotagmin VIIa. (742 aa)
	syt11	Synaptotagmin XIb. (467 aa)
	dtnbp1	Dystrobrevin binding protein 1b. (259 aa)
	LOC101170044	Gamma-synuclein; Belongs to the synuclein family. (124 aa)
	syt4	Synaptotagmin IV. (469 aa)
	LOC101162492	Synaptotagmin X. (551 aa)
	LOC101161806	Synaptotagmin IIa. (432 aa)
	drd3	Dopamine receptor D3; Belongs to the G-protein coupled receptor 1 family. (456 aa)
	LOC101174010	Synaptotagmin IXa. (562 aa)
	LOC101168745	Synuclein, gamma b (breast cancer-specific protein 1); Belongs to the synuclein family. (119 aa)
	LOC111947167	C2 domain-containing protein. (257 aa)

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101156534	LOC101171486	ENSORLP00000008623	ENSORLP00000015341	Synaptotagmin Vb.	Synaptotagmin IXb.	0.471
LOC101156534	LOC101174010	ENSORLP00000008623	ENSORLP00000044379	Synaptotagmin Vb.	Synaptotagmin IXa.	0.450
LOC101156534	LOC111947167	ENSORLP00000008623	ENSORLP00000045528	Synaptotagmin Vb.	C2 domain-containing protein.	0.617
LOC101156534	syt11	ENSORLP00000008623	ENSORLP00000035236	Synaptotagmin Vb.	Synaptotagmin XIb.	0.652
LOC101156534	syt4	ENSORLP00000008623	ENSORLP00000039252	Synaptotagmin Vb.	Synaptotagmin IV.	0.617
LOC101157206	LOC101171486	ENSORLP00000026249	ENSORLP00000015341	Uncharacterized protein.	Synaptotagmin IXb.	0.455
LOC101157206	LOC101174010	ENSORLP00000026249	ENSORLP00000044379	Uncharacterized protein.	Synaptotagmin IXa.	0.460
LOC101157206	LOC111947167	ENSORLP00000026249	ENSORLP00000045528	Uncharacterized protein.	C2 domain-containing protein.	0.617
LOC101157206	syt11	ENSORLP00000026249	ENSORLP00000035236	Uncharacterized protein.	Synaptotagmin XIb.	0.617
LOC101157206	syt4	ENSORLP00000026249	ENSORLP00000039252	Uncharacterized protein.	Synaptotagmin IV.	0.617
LOC101161806	LOC101171486	ENSORLP00000041194	ENSORLP00000015341	Synaptotagmin IIa.	Synaptotagmin IXb.	0.441
LOC101161806	LOC101174010	ENSORLP00000041194	ENSORLP00000044379	Synaptotagmin IIa.	Synaptotagmin IXa.	0.457
LOC101161806	LOC111947167	ENSORLP00000041194	ENSORLP00000045528	Synaptotagmin IIa.	C2 domain-containing protein.	0.617
LOC101161806	syt11	ENSORLP00000041194	ENSORLP00000035236	Synaptotagmin IIa.	Synaptotagmin XIb.	0.617
LOC101161806	syt4	ENSORLP00000041194	ENSORLP00000039252	Synaptotagmin IIa.	Synaptotagmin IV.	0.617
LOC101162836	LOC101171486	ENSORLP00000011014	ENSORLP00000015341	Synaptotagmin Ib.	Synaptotagmin IXb.	0.449
LOC101162836	LOC101174010	ENSORLP00000011014	ENSORLP00000044379	Synaptotagmin Ib.	Synaptotagmin IXa.	0.450
LOC101162836	LOC111947167	ENSORLP00000011014	ENSORLP00000045528	Synaptotagmin Ib.	C2 domain-containing protein.	0.617
LOC101162836	syt11	ENSORLP00000011014	ENSORLP00000035236	Synaptotagmin Ib.	Synaptotagmin XIb.	0.638
LOC101162836	syt4	ENSORLP00000011014	ENSORLP00000039252	Synaptotagmin Ib.	Synaptotagmin IV.	0.617