STRINGSTRING
card11 card11 ptprc ptprc LOC101173735 LOC101173735 RAB29 RAB29 LOC101162039 LOC101162039 LOC101172145 LOC101172145 slc39a6 slc39a6 cd226 cd226 LOC101163907 LOC101163907 LOC101174784 LOC101174784
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
card11Caspase recruitment domain family, member 11. (1146 aa)
ptprcProtein tyrosine phosphatase receptor type C. (1343 aa)
LOC101173735Potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4. (459 aa)
RAB29RAB29, member RAS oncogene family. (204 aa)
LOC101162039KRAP_IP3R_bind domain-containing protein. (667 aa)
LOC101172145CKLF-like MARVEL transmembrane domain containing 3. (171 aa)
slc39a6Solute carrier family 39 member 6. (709 aa)
cd226CD226 molecule. (353 aa)
LOC101163907Uncharacterized protein. (386 aa)
LOC101174784Uncharacterized protein. (822 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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