STRINGSTRING
npc1 npc1 LOC101172916 LOC101172916 NPC1L1 NPC1L1 CEL CEL ugcg ugcg ENSORLP00000025928 ENSORLP00000025928 scarb1 scarb1 ENSORLP00000030876 ENSORLP00000030876 LOC101156656 LOC101156656 LOC101166715 LOC101166715 LOC110014564 LOC110014564 LOC101164843 LOC101164843 LOC101161541 LOC101161541 LOC105355609 LOC105355609 LOC101163320 LOC101163320 LOC101174676 LOC101174676
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
npc1Niemann-Pick disease, type C1. (1271 aa)
LOC101172916Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family. (560 aa)
NPC1L1NPC1 like intracellular cholesterol transporter 1. (1297 aa)
CELCarboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family. (552 aa)
ugcgUDP-glucose ceramide glucosyltransferase. (422 aa)
ENSORLP00000025928Uncharacterized protein. (166 aa)
scarb1Scavenger receptor class B, member 1; Belongs to the CD36 family. (532 aa)
ENSORLP00000030876LIM zinc-binding domain-containing protein. (1167 aa)
LOC101156656LIM domain and actin binding 1a. (736 aa)
LOC101166715Uncharacterized protein; Belongs to the potassium channel family. (719 aa)
LOC110014564LIM zinc-binding domain-containing protein. (378 aa)
LOC101164843Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (189 aa)
LOC101161541Potassium voltage-gated channel, KQT-like subfamily, member 1.1; Belongs to the potassium channel family. (695 aa)
LOC105355609F11 receptor, tandem duplicate 1. (298 aa)
LOC101163320LIM zinc-binding domain-containing protein. (639 aa)
LOC101174676Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family. (560 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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