(68 nodes) Actin filament bundle assembly network (Oryzias latipes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	srf	Serum response factor b. (611 aa)
	LOC101171509	Uncharacterized protein. (1003 aa)
	ENSORLP00000044355	Uncharacterized protein. (104 aa)
	LOC101165469	Phosphatase and actin regulator. (622 aa)
	ENSORLP00000043712	Uncharacterized protein. (208 aa)
	ENSORLP00000043205	Uncharacterized protein. (300 aa)
	ENSORLP00000042927	Uncharacterized protein. (193 aa)
	LOC101157847	FH2 domain-containing protein. (1167 aa)
	ENSORLP00000041234	ANK_REP_REGION domain-containing protein. (276 aa)
	ENSORLP00000041152	Uncharacterized protein. (75 aa)
	LOC101157175	Uncharacterized protein. (336 aa)
	ENSORLP00000040498	HTH_Tnp_Tc3_2 domain-containing protein. (296 aa)
	tmem53	Transmembrane protein 53. (292 aa)
	LOC101166746	Phosphatase and actin regulator. (584 aa)
	fhdc1	FH2 domain containing 1. (1145 aa)
	CUL3	Cullin 3; Belongs to the cullin family. (766 aa)
	LOC101160178	Spire-type actin nucleation factor 1a. (789 aa)
	ENSORLP00000036728	Uncharacterized protein. (312 aa)
	fam171a1	Family with sequence similarity 171 member A1. (886 aa)
	pawr	PRKC, apoptosis, WT1, regulator. (323 aa)
	LOC110014564	LIM zinc-binding domain-containing protein. (378 aa)
	LOC101169477	Shroom family member 1. (1569 aa)
	ENSORLP00000034668	Uncharacterized protein. (320 aa)
	LOC101156656	LIM domain and actin binding 1a. (736 aa)
	espn	Espin. (911 aa)
	ENSORLP00000032718	Uncharacterized protein. (333 aa)
	LOC101154860	Uncharacterized protein. (193 aa)
	LOC105358811	MADS-box domain-containing protein. (552 aa)
	ppp1r12a	Protein phosphatase 1, regulatory subunit 12A. (1174 aa)
	ENSORLP00000030876	LIM zinc-binding domain-containing protein. (1167 aa)
	LOC101174308	Uncharacterized protein. (644 aa)
	LOC101171101	FH2 domain containing 3. (770 aa)
	LOC101175337	FH2 domain containing 4. (805 aa)
	BAIAP2	BAI1 associated protein 2. (577 aa)
	ENSORLP00000028548	Uncharacterized protein. (220 aa)
	SPIRE1	Spire type actin nucleation factor 1. (794 aa)
	zyx	Uncharacterized protein. (625 aa)
	ENSORLP00000028383	Uncharacterized protein. (95 aa)
	ENSORLP00000025928	Uncharacterized protein. (166 aa)
	LOC101165934	Dihydropyrimidinase like 3. (653 aa)
	marcks	Myristoylated alanine-rich protein kinase C substrate a. (289 aa)
	H2MQU8_ORYLA	DDE_3 domain-containing protein. (408 aa)
	LOC101163320	LIM zinc-binding domain-containing protein. (639 aa)
	spire2	Spire-type actin nucleation factor 2. (755 aa)
	LOC101162720	Lymphocyte cytosolic protein 1 (L-plastin). (619 aa)
	fam171a2	Family with sequence similarity 171 member A2b. (825 aa)
	fscn1	Fascin. (498 aa)
	LOC101168586	Plastin 1 (I isoform). (670 aa)
	LOC101172920	CULLIN_2 domain-containing protein; Belongs to the cullin family. (746 aa)
	LOC101161003	Zgc:158689. (663 aa)
	LOC101158738	Uncharacterized protein. (486 aa)
	baiap2l2	BAI1-associated protein 2-like 2b. (421 aa)
	LOC101156969	Uncharacterized protein. (281 aa)
	LOC101170402	Fascin. (492 aa)
	LOC101163820	BAI1-associated protein 2-like 1b. (511 aa)
	LOC101161915	Plastin 3. (622 aa)
	LOC101157305	Uncharacterized protein. (620 aa)
	LOC101170272	Fascin. (491 aa)
	LOC101169609	BAI1-associated protein 2a. (555 aa)
	AIF1	Allograft inflammatory factor 1. (154 aa)
	LOC105354922	FH2 domain-containing protein. (1002 aa)
	LOC101168365	Protein phosphatase 1 regulatory subunit. (908 aa)
	hsp90b1	Heat shock protein 90, beta (grp94), member 1. (796 aa)
	LOC101161658	Allograft inflammatory factor 1-like. (148 aa)
	fscn2	Fascin. (490 aa)
	baiap2l1	BAI1-associated protein 2-like 1a. (478 aa)
	Espnl	Espin like a. (622 aa)
	LOC101172560	Membrane-associated ring finger (C3HC4) 7. (810 aa)

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BAIAP2	LOC101161003	ENSORLP00000028846	ENSORLP00000013955	BAI1 associated protein 2.	Zgc:158689.	0.935
BAIAP2	LOC101163820	ENSORLP00000028846	ENSORLP00000011904	BAI1 associated protein 2.	BAI1-associated protein 2-like 1b.	0.466
BAIAP2	LOC101169609	ENSORLP00000028846	ENSORLP00000009348	BAI1 associated protein 2.	BAI1-associated protein 2a.	0.901
BAIAP2	baiap2l1	ENSORLP00000028846	ENSORLP00000004171	BAI1 associated protein 2.	BAI1-associated protein 2-like 1a.	0.464
CUL3	LOC101172920	ENSORLP00000037210	ENSORLP00000014201	Cullin 3; Belongs to the cullin family.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.900
ENSORLP00000028548	ENSORLP00000032718	ENSORLP00000028548	ENSORLP00000032718	Uncharacterized protein.	Uncharacterized protein.	0.444
ENSORLP00000028548	ENSORLP00000043205	ENSORLP00000028548	ENSORLP00000043205	Uncharacterized protein.	Uncharacterized protein.	0.444
ENSORLP00000032718	ENSORLP00000028548	ENSORLP00000032718	ENSORLP00000028548	Uncharacterized protein.	Uncharacterized protein.	0.444
ENSORLP00000041234	Espnl	ENSORLP00000041234	ENSORLP00000001365	ANK_REP_REGION domain-containing protein.	Espin like a.	0.830
ENSORLP00000043205	ENSORLP00000028548	ENSORLP00000043205	ENSORLP00000028548	Uncharacterized protein.	Uncharacterized protein.	0.444
Espnl	ENSORLP00000041234	ENSORLP00000001365	ENSORLP00000041234	Espin like a.	ANK_REP_REGION domain-containing protein.	0.830
Espnl	espn	ENSORLP00000001365	ENSORLP00000032813	Espin like a.	Espin.	0.835
LOC101161003	BAIAP2	ENSORLP00000013955	ENSORLP00000028846	Zgc:158689.	BAI1 associated protein 2.	0.935
LOC101161003	LOC101169609	ENSORLP00000013955	ENSORLP00000009348	Zgc:158689.	BAI1-associated protein 2a.	0.936
LOC101163820	BAIAP2	ENSORLP00000011904	ENSORLP00000028846	BAI1-associated protein 2-like 1b.	BAI1 associated protein 2.	0.466
LOC101163820	LOC101169609	ENSORLP00000011904	ENSORLP00000009348	BAI1-associated protein 2-like 1b.	BAI1-associated protein 2a.	0.465
LOC101169609	BAIAP2	ENSORLP00000009348	ENSORLP00000028846	BAI1-associated protein 2a.	BAI1 associated protein 2.	0.901
LOC101169609	LOC101161003	ENSORLP00000009348	ENSORLP00000013955	BAI1-associated protein 2a.	Zgc:158689.	0.936
LOC101169609	LOC101163820	ENSORLP00000009348	ENSORLP00000011904	BAI1-associated protein 2a.	BAI1-associated protein 2-like 1b.	0.465
LOC101169609	baiap2l1	ENSORLP00000009348	ENSORLP00000004171	BAI1-associated protein 2a.	BAI1-associated protein 2-like 1a.	0.462