STRINGSTRING
cdk5rap3 cdk5rap3 LOC101155936 LOC101155936 MAPKAPK2 MAPKAPK2 LOC101165590 LOC101165590 mapkapk5 mapkapk5 LOC101159256 LOC101159256 dusp10 dusp10 LOC101156348 LOC101156348 tpr tpr sirt1 sirt1 LOC101168423 LOC101168423 LOC101166327 LOC101166327 ppm1d ppm1d tnip1 tnip1 nbr1 nbr1 LOC101161367 LOC101161367
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
cdk5rap3CDK5 regulatory subunit associated protein 3. (500 aa)
LOC101155936NBR1 autophagy cargo receptor b. (871 aa)
MAPKAPK2MAPK activated protein kinase 2a; Belongs to the protein kinase superfamily. (389 aa)
LOC101165590Translocated promoter region a, nuclear basket protein. (1919 aa)
mapkapk5MAPK activated protein kinase 5. (469 aa)
LOC101159256Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (400 aa)
dusp10Dual specificity phosphatase 10; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (472 aa)
LOC101156348Protein phosphatase, Mg2+/Mn2+ dependent, 1Db. (566 aa)
tprTranslocated promoter region b, nuclear basket protein. (2165 aa)
sirt1Deacetylase sirtuin-type domain-containing protein. (680 aa)
LOC101168423GTP cyclohydrolase 1. (257 aa)
LOC101166327Si:dkey-175m17.7. (881 aa)
ppm1dProtein phosphatase, Mg2+/Mn2+ dependent, 1Da. (544 aa)
tnip1TNFAIP3 interacting protein 1. (650 aa)
nbr1NBR1 autophagy cargo receptor a. (1034 aa)
LOC101161367GTP cyclohydrolase 2. (236 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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