(32 nodes) Actin filament network formation network (Oryzias latipes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101165094	Cordon-bleu WH2 repeat protein. (1444 aa)
	LOC101170771	Uncharacterized protein. (1385 aa)
	ENSORLP00000040796	Formin_GBD_N domain-containing protein. (82 aa)
	ENSORLP00000042927	Uncharacterized protein. (193 aa)
	LOC101161915	Plastin 3. (622 aa)
	LOC101157305	Uncharacterized protein. (620 aa)
	ENSORLP00000043093	Formin_GBD_N domain-containing protein. (151 aa)
	ENSORLP00000043205	Uncharacterized protein. (300 aa)
	ENSORLP00000044834	Uncharacterized protein. (114 aa)
	H2LRZ6_ORYLA	Formin homology 2 domain containing 3b. (607 aa)
	LOC101168586	Plastin 1 (I isoform). (670 aa)
	H2MF95_ORYLA	Uncharacterized protein. (582 aa)
	LOC101162720	Lymphocyte cytosolic protein 1 (L-plastin). (619 aa)
	spire2	Spire-type actin nucleation factor 2. (755 aa)
	H2MQU8_ORYLA	DDE_3 domain-containing protein. (408 aa)
	H2MVY4_ORYLA	Capping protein regulator and myosin 1 linker 2. (1262 aa)
	ENSORLP00000025909	Formin_GBD_N domain-containing protein. (63 aa)
	LOC105356456	FH2 domain-containing protein. (560 aa)
	ENSORLP00000028383	Uncharacterized protein. (95 aa)
	SPIRE1	Spire type actin nucleation factor 1. (794 aa)
	ENSORLP00000028548	Uncharacterized protein. (220 aa)
	ENSORLP00000030549	GBD/FH3 domain-containing protein. (141 aa)
	ENSORLP00000032718	Uncharacterized protein. (333 aa)
	ENSORLP00000034668	Uncharacterized protein. (320 aa)
	carmil1	Uncharacterized protein. (1392 aa)
	ENSORLP00000044355	Uncharacterized protein. (104 aa)
	ENSORLP00000036728	Uncharacterized protein. (312 aa)
	LOC101160178	Spire-type actin nucleation factor 1a. (789 aa)
	ENSORLP00000039548	Formin homology 2 domain containing 1. (555 aa)
	ENSORLP00000040498	HTH_Tnp_Tc3_2 domain-containing protein. (296 aa)
	ENSORLP00000040790	GBD/FH3 domain-containing protein. (123 aa)
	ENSORLP00000043712	Uncharacterized protein. (208 aa)

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSORLP00000028548	ENSORLP00000032718	ENSORLP00000028548	ENSORLP00000032718	Uncharacterized protein.	Uncharacterized protein.	0.444
ENSORLP00000028548	ENSORLP00000043205	ENSORLP00000028548	ENSORLP00000043205	Uncharacterized protein.	Uncharacterized protein.	0.444
ENSORLP00000030549	ENSORLP00000039548	ENSORLP00000030549	ENSORLP00000039548	GBD/FH3 domain-containing protein.	Formin homology 2 domain containing 1.	0.899
ENSORLP00000030549	ENSORLP00000043093	ENSORLP00000030549	ENSORLP00000043093	GBD/FH3 domain-containing protein.	Formin_GBD_N domain-containing protein.	0.926
ENSORLP00000030549	H2LRZ6_ORYLA	ENSORLP00000030549	ENSORLP00000008854	GBD/FH3 domain-containing protein.	Formin homology 2 domain containing 3b.	0.900
ENSORLP00000030549	H2MF95_ORYLA	ENSORLP00000030549	ENSORLP00000017267	GBD/FH3 domain-containing protein.	Uncharacterized protein.	0.809
ENSORLP00000030549	LOC105356456	ENSORLP00000030549	ENSORLP00000027209	GBD/FH3 domain-containing protein.	FH2 domain-containing protein.	0.407
ENSORLP00000032718	ENSORLP00000028548	ENSORLP00000032718	ENSORLP00000028548	Uncharacterized protein.	Uncharacterized protein.	0.444
ENSORLP00000039548	ENSORLP00000030549	ENSORLP00000039548	ENSORLP00000030549	Formin homology 2 domain containing 1.	GBD/FH3 domain-containing protein.	0.899
ENSORLP00000039548	ENSORLP00000040790	ENSORLP00000039548	ENSORLP00000040790	Formin homology 2 domain containing 1.	GBD/FH3 domain-containing protein.	0.837
ENSORLP00000039548	ENSORLP00000043093	ENSORLP00000039548	ENSORLP00000043093	Formin homology 2 domain containing 1.	Formin_GBD_N domain-containing protein.	0.900
ENSORLP00000040790	ENSORLP00000039548	ENSORLP00000040790	ENSORLP00000039548	GBD/FH3 domain-containing protein.	Formin homology 2 domain containing 1.	0.837
ENSORLP00000040790	ENSORLP00000043093	ENSORLP00000040790	ENSORLP00000043093	GBD/FH3 domain-containing protein.	Formin_GBD_N domain-containing protein.	0.926
ENSORLP00000040790	H2LRZ6_ORYLA	ENSORLP00000040790	ENSORLP00000008854	GBD/FH3 domain-containing protein.	Formin homology 2 domain containing 3b.	0.900
ENSORLP00000040790	H2MF95_ORYLA	ENSORLP00000040790	ENSORLP00000017267	GBD/FH3 domain-containing protein.	Uncharacterized protein.	0.854
ENSORLP00000040790	LOC105356456	ENSORLP00000040790	ENSORLP00000027209	GBD/FH3 domain-containing protein.	FH2 domain-containing protein.	0.899
ENSORLP00000043093	ENSORLP00000030549	ENSORLP00000043093	ENSORLP00000030549	Formin_GBD_N domain-containing protein.	GBD/FH3 domain-containing protein.	0.926
ENSORLP00000043093	ENSORLP00000039548	ENSORLP00000043093	ENSORLP00000039548	Formin_GBD_N domain-containing protein.	Formin homology 2 domain containing 1.	0.900
ENSORLP00000043093	ENSORLP00000040790	ENSORLP00000043093	ENSORLP00000040790	Formin_GBD_N domain-containing protein.	GBD/FH3 domain-containing protein.	0.926
ENSORLP00000043093	LOC105356456	ENSORLP00000043093	ENSORLP00000027209	Formin_GBD_N domain-containing protein.	FH2 domain-containing protein.	0.989