STRINGSTRING
xbp1 xbp1 GOT1 GOT1 ENPP7 ENPP7 prkaa2 prkaa2 prkaa1 prkaa1 got1 got1 nr1h4 nr1h4 pold1 pold1 sirt1 sirt1 LOC101161673 LOC101161673 LOC101166003 LOC101166003 gpam gpam LOC101166399 LOC101166399
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
xbp1X-box binding protein 1. (259 aa)
GOT1Aspartate aminotransferase. (410 aa)
ENPP7Ectonucleotide pyrophosphatase/phosphodiesterase 7. (478 aa)
prkaa2Non-specific serine/threonine protein kinase. (557 aa)
prkaa1Non-specific serine/threonine protein kinase. (572 aa)
got1Aspartate aminotransferase. (449 aa)
nr1h4Nuclear receptor subfamily 1, group H, member 4. (485 aa)
pold1DNA polymerase. (1107 aa)
sirt1Deacetylase sirtuin-type domain-containing protein. (680 aa)
LOC101161673Apolipoprotein Eb. (265 aa)
LOC101166003Zgc:153896. (411 aa)
gpamGlycerol-3-phosphate acyltransferase 1, mitochondrial. (823 aa)
LOC101166399Apolipoprotein Ea. (262 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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