STRINGSTRING
u2af2 u2af2 wt1 wt1 ENSORLP00000034118 ENSORLP00000034118 wt1-2 wt1-2 LOC101155422 LOC101155422 LOC101167635 LOC101167635 gata-1 gata-1 ehmt2 ehmt2 lef1 lef1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
u2af2U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (470 aa)
wt1Uncharacterized protein. (435 aa)
ENSORLP00000034118ANK_REP_REGION domain-containing protein. (110 aa)
wt1-2Uncharacterized protein. (418 aa)
LOC101155422Uncharacterized protein. (115 aa)
LOC101167635Euchromatic histone-lysine N-methyltransferase 1b. (1331 aa)
gata-1Hematopietic transcription factor GATA-1. (417 aa)
ehmt2Euchromatic histone-lysine N-methyltransferase 2. (1187 aa)
lef1Lymphoid enhancer-binding factor 1. (379 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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