STRINGSTRING
scn3b scn3b nup155 nup155 LOC101169720 LOC101169720 RNF207 RNF207 LOC101166715 LOC101166715 LOC101161541 LOC101161541
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
scn3bSodium channel, voltage-gated, type III, beta. (216 aa)
nup155Nucleoporin 155. (1368 aa)
LOC101169720Sodium channel, voltage-gated, type IV, beta a. (232 aa)
RNF207Ring finger protein 207. (616 aa)
LOC101166715Uncharacterized protein; Belongs to the potassium channel family. (719 aa)
LOC101161541Potassium voltage-gated channel, KQT-like subfamily, member 1.1; Belongs to the potassium channel family. (695 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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