STRINGSTRING
cspg4 cspg4 LOC101163115 LOC101163115 H2MN86_ORYLA H2MN86_ORYLA bag4 bag4 LOC101159600 LOC101159600 H2M5H2_ORYLA H2M5H2_ORYLA AIF1 AIF1 ARHGEF26 ARHGEF26 LOC101161658 LOC101161658 LOC101173791 LOC101173791
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
cspg4Chondroitin sulfate proteoglycan 4. (2278 aa)
LOC101163115SH3-domain binding protein 1. (756 aa)
H2MN86_ORYLAADP-ribosylation factor 6b. (112 aa)
bag4BCL2 associated athanogene 4. (385 aa)
LOC101159600Uncharacterized protein. (2350 aa)
H2M5H2_ORYLAStonin-1; May be involved in the endocytic machinery. (703 aa)
AIF1Allograft inflammatory factor 1. (154 aa)
ARHGEF26Rho guanine nucleotide exchange factor 26. (929 aa)
LOC101161658Allograft inflammatory factor 1-like. (148 aa)
LOC101173791Si:dkey-193c22.2. (2396 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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