STRINGSTRING
fadd fadd casp9 casp9 LOC101168687 LOC101168687 bad bad LOC101156606 LOC101156606 casp8 casp8 LOC100125536 LOC100125536 lgmn lgmn ripk2 ripk2 LOC101164818 LOC101164818 LOC101167495 LOC101167495
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
faddUncharacterized protein. (192 aa)
casp9Caspase 9, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family. (438 aa)
LOC101168687Zgc:153993. (293 aa)
badBCL2 associated agonist of cell death b. (164 aa)
LOC101156606Asp-B-Hydro_N domain-containing protein. (601 aa)
casp8Uncharacterized protein; Belongs to the peptidase C14A family. (481 aa)
LOC100125536Uncharacterized protein; Belongs to the peptidase C14A family. (389 aa)
lgmnLegumain. (434 aa)
ripk2Receptor-interacting serine-threonine kinase 2. (590 aa)
LOC101164818Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family. (1252 aa)
LOC101167495Un-named hu7910. (689 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.