STRINGSTRING
LOC101163504 LOC101163504 LOC105357487 LOC105357487 LOC101160830 LOC101160830 LOC101173916 LOC101173916 tbx1 tbx1 mks1 mks1 bmpr2 bmpr2 SMAD4 SMAD4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC101163504Mothers against decapentaplegic homolog. (528 aa)
LOC105357487Activin_recp domain-containing protein. (762 aa)
LOC101160830Uncharacterized protein. (259 aa)
LOC101173916Mothers against decapentaplegic homolog. (538 aa)
tbx1T-box transcription factor 1. (503 aa)
mks1MKS transition zone complex subunit 1. (563 aa)
bmpr2Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (1056 aa)
SMAD4Mothers against decapentaplegic homolog. (510 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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