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pop1 pop1 rpp40 rpp40 pop4 pop4 H2MDZ5_ORYLA H2MDZ5_ORYLA H2MR55_ORYLA H2MR55_ORYLA pop5 pop5 LOC101158762 LOC101158762
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pop1POP1 homolog, ribonuclease P/MRP subunit. (953 aa)
rpp40Uncharacterized protein. (379 aa)
pop4Ribonuclease P protein subunit p29; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends. (221 aa)
H2MDZ5_ORYLARibonuclease P and MRP subunit p25, b. (217 aa)
H2MR55_ORYLARibonuclease P/MRP 25 subunit-like. (184 aa)
pop5Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. (166 aa)
LOC101158762Alba domain-containing protein. (187 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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