STRINGSTRING
LOC101164377 LOC101164377 LOC101166743 LOC101166743 LOC101164848 LOC101164848 ablim3 ablim3 avil avil LOC101165735 LOC101165735 vill vill ablim2 ablim2 svil svil ablim1 ablim1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC101164377Dematin actin binding protein. (405 aa)
LOC101166743HP domain-containing protein. (1630 aa)
LOC101164848Supervillin d. (1481 aa)
ablim3Actin binding LIM protein family, member 3. (695 aa)
avilAdvillin. (816 aa)
LOC101165735Supervillin c. (1560 aa)
villVillin-like. (881 aa)
ablim2Actin binding LIM protein family, member 2. (685 aa)
svilSupervillin a. (2193 aa)
ablim1Actin binding LIM protein 1a. (699 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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