(34 nodes) Small GTPase Rho network (Oryzias latipes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101155643	Rho family GTPase 2. (232 aa)
	Rhoh	Ras homolog family member H. (193 aa)
	LOC105354522	Rac family small GTPase 3b. (197 aa)
	H2LP85_ORYLA	Ras homolog gene family, member Gd. (120 aa)
	LOC101164658	Uncharacterized protein. (242 aa)
	LOC101155194	Uncharacterized protein. (193 aa)
	LOC101161977	Rho related BTB domain containing 4. (734 aa)
	rhou	Uncharacterized protein. (273 aa)
	CDC42	Cell division cycle 42. (191 aa)
	RND1	Rho family GTPase 1. (232 aa)
	RHOB	Ras homolog family member B. (191 aa)
	LOC101162944	Ras homolog family member Gb. (191 aa)
	LOC101170064	Uncharacterized protein. (220 aa)
	LOC101173444	Uncharacterized protein. (193 aa)
	rhoq	Ras homolog family member Q. (242 aa)
	LOC101158526	Rho family GTPase 2. (234 aa)
	rhot2	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family. (618 aa)
	LOC101170189	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family. (660 aa)
	LOC101174454	Uncharacterized protein. (191 aa)
	LOC101158607	Uncharacterized protein. (193 aa)
	LOC101171386	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family. (660 aa)
	rhov	Ras homolog family member V. (261 aa)
	LOC101168783	Rho family GTPase 1b. (232 aa)
	LOC101159016	Uncharacterized protein. (192 aa)
	LOC101164400	Uncharacterized protein. (191 aa)
	LOC101160539	Uncharacterized protein. (218 aa)
	LOC101162186	Uncharacterized protein. (282 aa)
	rhof	Ras homolog family member F. (209 aa)
	rnd3	Rho family GTPase 3a. (243 aa)
	LOC101175028	Uncharacterized protein. (192 aa)
	rhobtb2	Rho related BTB domain containing 2a. (720 aa)
	LOC101163549	Uncharacterized protein. (192 aa)
	LOC101167618	Uncharacterized protein. (193 aa)
	LOC101159601	Ras homolog family member Ub. (243 aa)

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDC42	H2LP85_ORYLA	ENSORLP00000015084	ENSORLP00000007865	Cell division cycle 42.	Ras homolog gene family, member Gd.	0.508
CDC42	LOC101155194	ENSORLP00000015084	ENSORLP00000010127	Cell division cycle 42.	Uncharacterized protein.	0.459
CDC42	LOC101158607	ENSORLP00000015084	ENSORLP00000029349	Cell division cycle 42.	Uncharacterized protein.	0.459
CDC42	LOC101159016	ENSORLP00000015084	ENSORLP00000034283	Cell division cycle 42.	Uncharacterized protein.	0.607
CDC42	LOC101159601	ENSORLP00000015084	ENSORLP00000045326	Cell division cycle 42.	Ras homolog family member Ub.	0.417
CDC42	LOC101160539	ENSORLP00000015084	ENSORLP00000034593	Cell division cycle 42.	Uncharacterized protein.	0.465
CDC42	LOC101162944	ENSORLP00000015084	ENSORLP00000017316	Cell division cycle 42.	Ras homolog family member Gb.	0.505
CDC42	LOC101163549	ENSORLP00000015084	ENSORLP00000040285	Cell division cycle 42.	Uncharacterized protein.	0.607
CDC42	LOC101167618	ENSORLP00000015084	ENSORLP00000040404	Cell division cycle 42.	Uncharacterized protein.	0.458
CDC42	LOC101168783	ENSORLP00000015084	ENSORLP00000031423	Cell division cycle 42.	Rho family GTPase 1b.	0.415
CDC42	LOC101173444	ENSORLP00000015084	ENSORLP00000023516	Cell division cycle 42.	Uncharacterized protein.	0.458
CDC42	LOC101175028	ENSORLP00000015084	ENSORLP00000039764	Cell division cycle 42.	Uncharacterized protein.	0.607
CDC42	LOC105354522	ENSORLP00000015084	ENSORLP00000003336	Cell division cycle 42.	Rac family small GTPase 3b.	0.608
CDC42	RHOB	ENSORLP00000015084	ENSORLP00000015802	Cell division cycle 42.	Ras homolog family member B.	0.462
CDC42	RND1	ENSORLP00000015084	ENSORLP00000015416	Cell division cycle 42.	Rho family GTPase 1.	0.416
CDC42	Rhoh	ENSORLP00000015084	ENSORLP00000007155	Cell division cycle 42.	Ras homolog family member H.	0.427
CDC42	rhof	ENSORLP00000015084	ENSORLP00000037778	Cell division cycle 42.	Ras homolog family member F.	0.411
CDC42	rhoq	ENSORLP00000015084	ENSORLP00000026082	Cell division cycle 42.	Ras homolog family member Q.	0.422
CDC42	rhou	ENSORLP00000015084	ENSORLP00000013398	Cell division cycle 42.	Uncharacterized protein.	0.426
CDC42	rhov	ENSORLP00000015084	ENSORLP00000030695	Cell division cycle 42.	Ras homolog family member V.	0.423