STRINGSTRING
pole3 pole3 nfyb nfyb LOC105356975 LOC105356975 drap1 drap1 pole4 pole4 dr1 dr1 chrac1 chrac1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pole3CBFD_NFYB_HMF domain-containing protein. (148 aa)
nfybNuclear transcription factor Y, beta a. (264 aa)
LOC105356975CBFD_NFYB_HMF domain-containing protein. (150 aa)
drap1DR1-associated protein 1 (negative cofactor 2 alpha). (230 aa)
pole4Polymerase (DNA-directed), epsilon 4, accessory subunit. (124 aa)
dr1Down-regulator of transcription 1. (175 aa)
chrac1Chromatin accessibility complex subunit 1. (119 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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