STRINGSTRING
slc3a1 slc3a1 LOC101163630 LOC101163630 LOC101167257 LOC101167257 slc3a2 slc3a2 gbe1 gbe1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
slc3a1Solute carrier family 3 member 1. (684 aa)
LOC101163630Alpha-amylase. (512 aa)
LOC101167257Aamy domain-containing protein. (522 aa)
slc3a2Solute carrier family 3 member 2a. (501 aa)
gbe1Glucan (1,4-alpha-), branching enzyme 1b. (717 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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