(9 nodes) RmlC-like cupin domain superfamily network (Oryzias latipes)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:
	ggcx	Gamma-glutamyl carboxylase. (764 aa)
	LOC101154908	CENP-C_C domain-containing protein. (958 aa)
	cdo1	Cysteine dioxygenase. (227 aa)
	hgd	Homogentisate 1,2-dioxygenase. (454 aa)
	mpi	Mannose phosphate isomerase. (397 aa)
	LOC101157575	2-aminoethanethiol (cysteamine) dioxygenase a. (255 aa)
	haao	3-hydroxyanthranilate 3,4-dioxygenase; Catalyzes the oxidative ring opening of 3-hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate; Belongs to the 3-HAO family. (287 aa)
	ENSORLP00000028331	2-aminoethanethiol (cysteamine) dioxygenase b. (257 aa)
	adi1	1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase; Catalyzes the formation of formate and 2-keto-4- methylthiobutyrate (KMTB) from 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene). Also down-regulates cell migration mediated by MMP14. Belongs to the acireductone dioxygenase (ARD) family. (179 aa)

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSORLP00000028331	LOC101157575	ENSORLP00000028331	ENSORLP00000037384	2-aminoethanethiol (cysteamine) dioxygenase b.	2-aminoethanethiol (cysteamine) dioxygenase a.	0.902
ENSORLP00000028331	cdo1	ENSORLP00000028331	ENSORLP00000004212	2-aminoethanethiol (cysteamine) dioxygenase b.	Cysteine dioxygenase.	0.531
LOC101157575	ENSORLP00000028331	ENSORLP00000037384	ENSORLP00000028331	2-aminoethanethiol (cysteamine) dioxygenase a.	2-aminoethanethiol (cysteamine) dioxygenase b.	0.902
LOC101157575	cdo1	ENSORLP00000037384	ENSORLP00000004212	2-aminoethanethiol (cysteamine) dioxygenase a.	Cysteine dioxygenase.	0.531
cdo1	ENSORLP00000028331	ENSORLP00000004212	ENSORLP00000028331	Cysteine dioxygenase.	2-aminoethanethiol (cysteamine) dioxygenase b.	0.531
cdo1	LOC101157575	ENSORLP00000004212	ENSORLP00000037384	Cysteine dioxygenase.	2-aminoethanethiol (cysteamine) dioxygenase a.	0.531
haao	hgd	ENSORLP00000037020	ENSORLP00000044660	3-hydroxyanthranilate 3,4-dioxygenase; Catalyzes the oxidative ring opening of 3-hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate; Belongs to the 3-HAO family.	Homogentisate 1,2-dioxygenase.	0.436
hgd	haao	ENSORLP00000044660	ENSORLP00000037020	Homogentisate 1,2-dioxygenase.	3-hydroxyanthranilate 3,4-dioxygenase; Catalyzes the oxidative ring opening of 3-hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate; Belongs to the 3-HAO family.	0.436