STRINGSTRING
fancm fancm ercc4 ercc4 LOC111946278 LOC111946278 ercc1 ercc1 LOC111948827 LOC111948827 LOC105358398 LOC105358398 mus81 mus81 LOC111946676 LOC111946676
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
fancmUncharacterized protein. (1993 aa)
ercc4Excision repair cross-complementation group 4. (889 aa)
LOC111946278SWIM-type domain-containing protein. (443 aa)
ercc1Excision repair cross-complementation group 1. (341 aa)
LOC111948827YqaJ domain-containing protein. (337 aa)
LOC105358398YqaJ domain-containing protein. (359 aa)
mus81MUS81 structure-specific endonuclease subunit. (656 aa)
LOC111946676YqaJ domain-containing protein. (337 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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