STRINGSTRING
mlh3 mlh3 mlh1 mlh1 pms1 pms1 pms2 pms2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
mlh3MutL homolog 3 (E. coli). (1125 aa)
mlh1MutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli). (720 aa)
pms1PMS1 homolog 1, mismatch repair system component. (991 aa)
pms2PMS1 homolog 2, mismatch repair system component. (828 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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