9 items (Oryzias latipes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H2M970_ORYLA	Ubiquitin-like domain-containing protein. (129 aa)
	ubc	Ubiquitin B. (782 aa)
	usp14	Ubiquitin carboxyl-terminal hydrolase. (491 aa)
	ENSORLP00000027520	Ubiquitin-like domain-containing protein. (92 aa)
	ENSORLP00000045836	Ubiquitin-like domain-containing protein. (88 aa)
	uba52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
	ubl4a	Ubiquitin like 4A. (155 aa)
	ubfd1	Ubiquitin family domain containing 1. (285 aa)
	H2L6N3_ORYLA	Ubiquitin-like domain-containing protein. (87 aa)

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSORLP00000027520	H2L6N3_ORYLA	ENSORLP00000027520	ENSORLP00000001483	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.589
ENSORLP00000027520	H2M970_ORYLA	ENSORLP00000027520	ENSORLP00000015051	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.872
ENSORLP00000027520	uba52	ENSORLP00000027520	ENSORLP00000010731	Ubiquitin-like domain-containing protein.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.869
ENSORLP00000027520	ubc	ENSORLP00000027520	ENSORLP00000015065	Ubiquitin-like domain-containing protein.	Ubiquitin B.	0.833
ENSORLP00000027520	ubfd1	ENSORLP00000027520	ENSORLP00000006143	Ubiquitin-like domain-containing protein.	Ubiquitin family domain containing 1.	0.569
ENSORLP00000027520	ubl4a	ENSORLP00000027520	ENSORLP00000013888	Ubiquitin-like domain-containing protein.	Ubiquitin like 4A.	0.656
ENSORLP00000027520	usp14	ENSORLP00000027520	ENSORLP00000022064	Ubiquitin-like domain-containing protein.	Ubiquitin carboxyl-terminal hydrolase.	0.652
ENSORLP00000045836	H2L6N3_ORYLA	ENSORLP00000045836	ENSORLP00000001483	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.575
ENSORLP00000045836	H2M970_ORYLA	ENSORLP00000045836	ENSORLP00000015051	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.869
ENSORLP00000045836	uba52	ENSORLP00000045836	ENSORLP00000010731	Ubiquitin-like domain-containing protein.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.867
ENSORLP00000045836	ubc	ENSORLP00000045836	ENSORLP00000015065	Ubiquitin-like domain-containing protein.	Ubiquitin B.	0.833
ENSORLP00000045836	ubfd1	ENSORLP00000045836	ENSORLP00000006143	Ubiquitin-like domain-containing protein.	Ubiquitin family domain containing 1.	0.569
ENSORLP00000045836	ubl4a	ENSORLP00000045836	ENSORLP00000013888	Ubiquitin-like domain-containing protein.	Ubiquitin like 4A.	0.595
ENSORLP00000045836	usp14	ENSORLP00000045836	ENSORLP00000022064	Ubiquitin-like domain-containing protein.	Ubiquitin carboxyl-terminal hydrolase.	0.652
H2L6N3_ORYLA	ENSORLP00000027520	ENSORLP00000001483	ENSORLP00000027520	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.589
H2L6N3_ORYLA	ENSORLP00000045836	ENSORLP00000001483	ENSORLP00000045836	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.575
H2L6N3_ORYLA	H2M970_ORYLA	ENSORLP00000001483	ENSORLP00000015051	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.908
H2L6N3_ORYLA	uba52	ENSORLP00000001483	ENSORLP00000010731	Ubiquitin-like domain-containing protein.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.908
H2L6N3_ORYLA	ubfd1	ENSORLP00000001483	ENSORLP00000006143	Ubiquitin-like domain-containing protein.	Ubiquitin family domain containing 1.	0.605
H2L6N3_ORYLA	usp14	ENSORLP00000001483	ENSORLP00000022064	Ubiquitin-like domain-containing protein.	Ubiquitin carboxyl-terminal hydrolase.	0.605