STRINGSTRING
LOC101174762 LOC101174762 LOC100049265 LOC100049265 casp3 casp3 LOC100125536 LOC100125536 casp8 casp8 casp2 casp2 H2MXM9_ORYLA H2MXM9_ORYLA casp7 casp7 casp9 casp9 CASP6 CASP6
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC101174762Uncharacterized protein; Belongs to the peptidase C14A family. (388 aa)
LOC100049265Caspase 3, apoptosis-related cysteine peptidase a; Belongs to the peptidase C14A family. (265 aa)
casp3Uncharacterized protein; Belongs to the peptidase C14A family. (290 aa)
LOC100125536Uncharacterized protein; Belongs to the peptidase C14A family. (389 aa)
casp8Uncharacterized protein; Belongs to the peptidase C14A family. (481 aa)
casp2Caspase 2, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family. (501 aa)
H2MXM9_ORYLACaspase 6, apoptosis-related cysteine peptidase a; Belongs to the peptidase C14A family. (209 aa)
casp7Caspase 7, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family. (314 aa)
casp9Caspase 9, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family. (438 aa)
CASP6Caspase 6; Belongs to the peptidase C14A family. (292 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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