(9 nodes) Rabphilin/Doc2/Noc2 network (Oryzias latipes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSORLP00000041927	Rabphilin 3A homolog (mouse), a. (101 aa)
	H2L484_ORYLA	C2 domain-containing protein. (240 aa)
	LOC101175439	Double C2-like domains, alpha. (441 aa)
	H2M963_ORYLA	Uncharacterized protein. (343 aa)
	LOC101167710	Uncharacterized protein. (821 aa)
	ENSORLP00000036347	C2 domain-containing protein. (108 aa)
	ENSORLP00000039004	C2 domain-containing protein. (115 aa)
	LOC101154838	Double C2-like domains, delta. (426 aa)
	doc2b	Double C2-like domain-containing protein. (394 aa)

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSORLP00000039004	H2L484_ORYLA	ENSORLP00000039004	ENSORLP00000000569	C2 domain-containing protein.	C2 domain-containing protein.	0.900
ENSORLP00000039004	H2M963_ORYLA	ENSORLP00000039004	ENSORLP00000015043	C2 domain-containing protein.	Uncharacterized protein.	0.896
H2L484_ORYLA	ENSORLP00000039004	ENSORLP00000000569	ENSORLP00000039004	C2 domain-containing protein.	C2 domain-containing protein.	0.900
H2L484_ORYLA	H2M963_ORYLA	ENSORLP00000000569	ENSORLP00000015043	C2 domain-containing protein.	Uncharacterized protein.	0.899
H2M963_ORYLA	ENSORLP00000039004	ENSORLP00000015043	ENSORLP00000039004	Uncharacterized protein.	C2 domain-containing protein.	0.896
H2M963_ORYLA	H2L484_ORYLA	ENSORLP00000015043	ENSORLP00000000569	Uncharacterized protein.	C2 domain-containing protein.	0.899
H2M963_ORYLA	LOC101154838	ENSORLP00000015043	ENSORLP00000039547	Uncharacterized protein.	Double C2-like domains, delta.	0.758
H2M963_ORYLA	LOC101167710	ENSORLP00000015043	ENSORLP00000027187	Uncharacterized protein.	Uncharacterized protein.	0.647
H2M963_ORYLA	LOC101175439	ENSORLP00000015043	ENSORLP00000007682	Uncharacterized protein.	Double C2-like domains, alpha.	0.729
H2M963_ORYLA	doc2b	ENSORLP00000015043	ENSORLP00000041807	Uncharacterized protein.	Double C2-like domain-containing protein.	0.803
LOC101154838	H2M963_ORYLA	ENSORLP00000039547	ENSORLP00000015043	Double C2-like domains, delta.	Uncharacterized protein.	0.758
LOC101167710	H2M963_ORYLA	ENSORLP00000027187	ENSORLP00000015043	Uncharacterized protein.	Uncharacterized protein.	0.647
LOC101175439	H2M963_ORYLA	ENSORLP00000007682	ENSORLP00000015043	Double C2-like domains, alpha.	Uncharacterized protein.	0.729
doc2b	H2M963_ORYLA	ENSORLP00000041807	ENSORLP00000015043	Double C2-like domain-containing protein.	Uncharacterized protein.	0.803