STRINGSTRING
uba52 uba52 ENSORLP00000044710 ENSORLP00000044710 rfc1 rfc1 LOC101172133 LOC101172133 rpa3 rpa3 rps27a rps27a pcna pcna rfc5 rfc5 rcbtb2 rcbtb2 rfc4 rfc4 rfc2 rfc2 rev3l rev3l rpa2 rpa2 rev1 rev1 ubc ubc H2M970_ORYLA H2M970_ORYLA RCBTB1 RCBTB1 kxd1 kxd1 LOC101166554 LOC101166554 LOC101165789 LOC101165789 rpa1 rpa1 rfc3 rfc3 RPA1 RPA1 meiob meiob
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
uba52Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
ENSORLP00000044710annotation not available (829 aa)
rfc1Replication factor C subunit 1. (1152 aa)
LOC101172133ATPase family AAA domain containing 5b. (959 aa)
rpa3Replication protein A3. (122 aa)
rps27aRibosomal protein S27a. (195 aa)
pcnaProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (298 aa)
rfc5Replication factor C (activator 1) 5. (335 aa)
rcbtb2Regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2. (527 aa)
rfc4Replication factor C (activator 1) 4. (355 aa)
rfc2Replication factor C (activator 1) 2. (355 aa)
rev3lREV3 like, DNA directed polymerase zeta catalytic subunit. (2967 aa)
rpa2Replication protein A2. (280 aa)
rev1REV1 DNA directed polymerase. (1375 aa)
ubcUbiquitin B. (782 aa)
H2M970_ORYLAUbiquitin-like domain-containing protein. (129 aa)
RCBTB1RCC1 and BTB domain containing protein 1. (531 aa)
kxd1KxDL motif containing 1. (184 aa)
LOC101166554ATPase family AAA domain containing 5a. (1758 aa)
LOC101165789Regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1. (589 aa)
rpa1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (598 aa)
rfc3Replication factor C (activator 1) 3. (356 aa)
RPA1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (655 aa)
meiobMethionine sulfoxide reductase B1b. (462 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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