STRINGSTRING
psmb9 psmb9 psmd13 psmd13 LOC101157953 LOC101157953 skp1 skp1 psma1 psma1 psmb4 psmb4 psma4 psma4 REL REL psmd8 psmd8 ikbkb ikbkb LOC101158788 LOC101158788 cul1 cul1 psmd14 psmd14 fbxw11 fbxw11 psmd5 psmd5 psmc5 psmc5 psmd9 psmd9 psma2 psma2 psme1 psme1 psmb9-like psmb9-like psmd1 psmd1 psmd6 psmd6 uba52 uba52 LOC101155046 LOC101155046 LOC101171857 LOC101171857 LOC101173089 LOC101173089 psmb2 psmb2 H2M2L4_ORYLA H2M2L4_ORYLA psma3 psma3 psmd7 psmd7 psmc3 psmc3 psmb1 psmb1 LOC101158728 LOC101158728 H2M970_ORYLA H2M970_ORYLA ubc ubc CHUK CHUK psme2 psme2 card11 card11 psmc6 psmc6 psmc1 psmc1 LOC101162015 LOC101162015 psma5 psma5 psmc4 psmc4 psmf1 psmf1 nfkbia nfkbia LOC101158678 LOC101158678 LOC101174330 LOC101174330 psme3 psme3 LOC111948194 LOC111948194 psmc2 psmc2 psmd12 psmd12 ENSORLP00000033333 ENSORLP00000033333 psmd10 psmd10 psma8 psma8 psme4 psme4 psmb3 psmb3 LOC111949049 LOC111949049 rps27a rps27a psmb7 psmb7 ENSORLP00000038704 ENSORLP00000038704 LOC101158686 LOC101158686 LOC101174707 LOC101174707 LOC101158194 LOC101158194 pafah1b1 pafah1b1 psmd3 psmd3 LOC101162259 LOC101162259 LOC101171170 LOC101171170 psmb8 psmb8 nfkbie nfkbie
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
psmb9Proteasome subunit beta type-9; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity. This subunit is involved in antigen processing to generate class I binding peptides (By similarity). (216 aa)
psmd13Proteasome 26S subunit, non-ATPase 13. (378 aa)
LOC101157953Proteasome 26S subunit, non-ATPase 4a. (372 aa)
skp1S-phase kinase-associated protein 1; Belongs to the SKP1 family. (163 aa)
psma1Proteasome endopeptidase complex. (238 aa)
psmb4Proteasome subunit beta; Belongs to the peptidase T1B family. (259 aa)
psma4Proteasome subunit alpha type. (261 aa)
RELREL proto-oncogene, NF-kB subunit. (623 aa)
psmd8Proteasome 26S subunit, non-ATPase 8. (265 aa)
ikbkbInhibitor of nuclear factor kappa B kinase subunit beta. (801 aa)
LOC101158788Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes such as the maintenance of Golgi integrity, the peripheral transport of microtubule fragments and the coupling of the nucleus and centrosome. May be required for proliferation of neuronal precursors and neuronal migration; Belongs to the WD repeat LIS1/nudF family. (410 aa)
cul1Cullin 1b; Belongs to the cullin family. (801 aa)
psmd14Proteasome 26S subunit, non-ATPase 14. (325 aa)
fbxw11F-box and WD repeat domain containing 11a. (562 aa)
psmd5Proteasome 26S subunit, non-ATPase 5. (524 aa)
psmc5Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family. (406 aa)
psmd9Proteasome 26S subunit, non-ATPase 9. (212 aa)
psma2Proteasome subunit alpha type. (234 aa)
psme1Proteasome activator subunit 1. (250 aa)
psmb9-likeProteasome subunit, beta type 9-like. (217 aa)
psmd126S proteasome non-ATPase regulatory subunit 1; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S1 family. (961 aa)
psmd6Proteasome 26S subunit, non-ATPase 6. (389 aa)
uba52Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
LOC101155046Proteasome subunit alpha type. (246 aa)
LOC101171857Component of inhibitor of nuclear factor kappa B kinase complex. (732 aa)
LOC101173089Proteasome 26S subunit, non-ATPase 4b. (376 aa)
psmb2Proteasome subunit beta. (199 aa)
H2M2L4_ORYLABLM10_mid domain-containing protein. (567 aa)
psma3Proteasome subunit alpha type. (255 aa)
psmd7Proteasome 26S subunit, non-ATPase 7. (324 aa)
psmc3Proteasome 26S subunit ATPase 3; Belongs to the AAA ATPase family. (427 aa)
psmb1Proteasome subunit beta. (237 aa)
LOC101158728V-rel avian reticuloendotheliosis viral oncogene homolog A. (617 aa)
H2M970_ORYLAUbiquitin-like domain-containing protein. (129 aa)
ubcUbiquitin B. (782 aa)
CHUKComponent of inhibitor of nuclear factor kappa B kinase complex. (765 aa)
psme2Proteasome activator subunit 2. (241 aa)
card11Caspase recruitment domain family, member 11. (1146 aa)
psmc6Proteasome 26S subunit, ATPase 6; Belongs to the AAA ATPase family. (389 aa)
psmc1Proteasome 26S subunit, ATPase 1b; Belongs to the AAA ATPase family. (443 aa)
LOC101162015Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a. (303 aa)
psma5Proteasome subunit alpha type. (241 aa)
psmc4Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family. (417 aa)
psmf1Uncharacterized protein. (271 aa)
nfkbiaNuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b. (316 aa)
LOC101158678Proteasome subunit beta. (278 aa)
LOC101174330PCI domain-containing protein. (468 aa)
psme3Proteasome activator subunit 3. (256 aa)
LOC111948194Proteasome subunit beta. (275 aa)
psmc2Proteasome 26S subunit, ATPase 2; Belongs to the AAA ATPase family. (433 aa)
psmd12Proteasome 26S subunit, non-ATPase 12. (457 aa)
ENSORLP00000033333Proteasome subunit beta. (293 aa)
psmd10Proteasome 26S subunit, non-ATPase 10. (226 aa)
psma8Proteasome subunit alpha type. (251 aa)
psme4Proteasome activator subunit 4a. (1848 aa)
psmb3Proteasome subunit beta 3. (223 aa)
LOC111949049Proteasome subunit beta. (276 aa)
rps27aRibosomal protein S27a. (195 aa)
psmb7Proteasome subunit beta. (286 aa)
ENSORLP00000038704DUF3437 domain-containing protein. (311 aa)
LOC101158686MALT paracaspase 2. (843 aa)
LOC101174707Proteasome 26S subunit, non-ATPase 11b. (422 aa)
LOC101158194MALT paracaspase 3. (557 aa)
pafah1b1Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes such as the maintenance of Golgi integrity, the peripheral transport of microtubule fragments and the coupling of the nucleus and centrosome. May be required for proliferation of neuronal precursors and neuronal migration; Belongs to the WD repeat LIS1/nudF family. (410 aa)
psmd3Proteasome 26S subunit, non-ATPase 3. (516 aa)
LOC101162259Proteasome endopeptidase complex. (320 aa)
LOC101171170MALT paracaspase 1. (811 aa)
psmb8Proteasome subunit beta. (275 aa)
nfkbieNuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon. (344 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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