15 items (Oryzias latipes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	drap1	DR1-associated protein 1 (negative cofactor 2 alpha). (230 aa)
	LOC101169523	Mothers against decapentaplegic homolog. (425 aa)
	SMAD4	Mothers against decapentaplegic homolog. (510 aa)
	smad3	Mothers against decapentaplegic homolog. (425 aa)
	gdf3	Growth differentiation factor 3. (376 aa)
	smad2	Mothers against decapentaplegic homolog. (473 aa)
	LOC101159747	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (389 aa)
	LOC101159109	Mothers against decapentaplegic homolog. (467 aa)
	LOC101163834	Teratocarcinoma-derived growth factor 1. (206 aa)
	LOC101173916	Mothers against decapentaplegic homolog. (538 aa)
	foxh1	Forkhead box H1. (511 aa)
	foxo3	Forkhead box O5. (668 aa)
	LOC101162905	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (369 aa)
	LOC101163504	Mothers against decapentaplegic homolog. (528 aa)
	ENSORLP00000045700	TGF_BETA_2 domain-containing protein. (131 aa)

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSORLP00000045700	LOC101159109	ENSORLP00000045700	ENSORLP00000019646	TGF_BETA_2 domain-containing protein.	Mothers against decapentaplegic homolog.	0.476
ENSORLP00000045700	LOC101163834	ENSORLP00000045700	ENSORLP00000027564	TGF_BETA_2 domain-containing protein.	Teratocarcinoma-derived growth factor 1.	0.631
ENSORLP00000045700	gdf3	ENSORLP00000045700	ENSORLP00000012947	TGF_BETA_2 domain-containing protein.	Growth differentiation factor 3.	0.761
ENSORLP00000045700	smad2	ENSORLP00000045700	ENSORLP00000014831	TGF_BETA_2 domain-containing protein.	Mothers against decapentaplegic homolog.	0.476
LOC101159109	ENSORLP00000045700	ENSORLP00000019646	ENSORLP00000045700	Mothers against decapentaplegic homolog.	TGF_BETA_2 domain-containing protein.	0.476
LOC101159109	LOC101159747	ENSORLP00000019646	ENSORLP00000015020	Mothers against decapentaplegic homolog.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.943
LOC101159109	LOC101162905	ENSORLP00000019646	ENSORLP00000039541	Mothers against decapentaplegic homolog.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.943
LOC101159109	LOC101163504	ENSORLP00000019646	ENSORLP00000045202	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.979
LOC101159109	LOC101169523	ENSORLP00000019646	ENSORLP00000002748	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.900
LOC101159109	LOC101173916	ENSORLP00000019646	ENSORLP00000029700	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.979
LOC101159109	SMAD4	ENSORLP00000019646	ENSORLP00000006328	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.988
LOC101159109	foxh1	ENSORLP00000019646	ENSORLP00000032891	Mothers against decapentaplegic homolog.	Forkhead box H1.	0.804
LOC101159109	foxo3	ENSORLP00000019646	ENSORLP00000037109	Mothers against decapentaplegic homolog.	Forkhead box O5.	0.943
LOC101159109	smad2	ENSORLP00000019646	ENSORLP00000014831	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.543
LOC101159109	smad3	ENSORLP00000019646	ENSORLP00000008548	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.549
LOC101159747	LOC101159109	ENSORLP00000015020	ENSORLP00000019646	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Mothers against decapentaplegic homolog.	0.943
LOC101159747	LOC101162905	ENSORLP00000015020	ENSORLP00000039541	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.901
LOC101159747	LOC101169523	ENSORLP00000015020	ENSORLP00000002748	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Mothers against decapentaplegic homolog.	0.943
LOC101159747	foxo3	ENSORLP00000015020	ENSORLP00000037109	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Forkhead box O5.	0.916
LOC101159747	smad2	ENSORLP00000015020	ENSORLP00000014831	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Mothers against decapentaplegic homolog.	0.460