39 items (Oryzias latipes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H2L406_ORYLA	Mitogen-activated protein kinase. (360 aa)
	traf6	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (569 aa)
	ikbkg	Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma. (585 aa)
	nod1	Nucleotide-binding oligomerization domain containing 1. (938 aa)
	LOC101172600	Baculoviral IAP repeat containing 2. (707 aa)
	LOC101174762	Uncharacterized protein; Belongs to the peptidase C14A family. (388 aa)
	LOC101163933	Mitogen-activated protein kinase kinase 6. (358 aa)
	ripk2	Receptor-interacting serine-threonine kinase 2. (590 aa)
	uba52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
	LOC101175696	Mitogen-activated protein kinase. (354 aa)
	LOC101154993	Mitogen-activated protein kinase. (368 aa)
	tab1	TGF-beta activated kinase 1/MAP3K7 binding protein 1. (504 aa)
	casp8	Uncharacterized protein; Belongs to the peptidase C14A family. (481 aa)
	ube2n	Ubiquitin-conjugating enzyme E2Nb; Belongs to the ubiquitin-conjugating enzyme family. (154 aa)
	H2M970_ORYLA	Ubiquitin-like domain-containing protein. (129 aa)
	ubc	Ubiquitin B. (782 aa)
	casp2	Caspase 2, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family. (501 aa)
	cyld	Cylindromatosis (turban tumor syndrome), a; Belongs to the peptidase C19 family. (918 aa)
	LOC101163809	Cylindromatosis (turban tumor syndrome), b. (707 aa)
	LOC101168074	Mitogen-activated protein kinase kinase kinase 20. (666 aa)
	LOC101159668	Mitogen-activated protein kinase. (361 aa)
	map3k20	Uncharacterized protein. (802 aa)
	H2MX42_ORYLA	Zgc:171775. (273 aa)
	tab3	TGF-beta activated kinase 1 (MAP3K7) binding protein 3. (610 aa)
	LOC101160731	Mitogen-activated protein kinase. (360 aa)
	map3k7	Mitogen-activated protein kinase kinase kinase 7. (595 aa)
	tab2	TGF-beta activated kinase 1 (MAP3K7) binding protein 2. (733 aa)
	LOC101162042	Mitogen-activated protein kinase. (361 aa)
	aamp	Angio-associated, migratory cell protein. (417 aa)
	birc7	RING-type domain-containing protein. (399 aa)
	LOC101170318	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (153 aa)
	LOC101174746	E3 ubiquitin-protein ligase. (877 aa)
	LOC101168449	Cylindromatosis (turban tumor syndrome), like; Belongs to the peptidase C19 family. (769 aa)
	rps27a	Ribosomal protein S27a. (195 aa)
	LOC101167576	Uncharacterized protein. (943 aa)
	LOC101170843	Protein kinase domain-containing protein. (336 aa)
	casp9	Caspase 9, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family. (438 aa)
	LOC101167949	E3 ubiquitin-protein ligase. (879 aa)
	LOC105356874	Protein kinase domain-containing protein. (501 aa)

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H2L406_ORYLA	LOC101163933	ENSORLP00000000486	ENSORLP00000009468	Mitogen-activated protein kinase.	Mitogen-activated protein kinase kinase 6.	0.756
H2L406_ORYLA	LOC101170843	ENSORLP00000000486	ENSORLP00000038835	Mitogen-activated protein kinase.	Protein kinase domain-containing protein.	0.756
H2L406_ORYLA	tab1	ENSORLP00000000486	ENSORLP00000013462	Mitogen-activated protein kinase.	TGF-beta activated kinase 1/MAP3K7 binding protein 1.	0.722
H2M970_ORYLA	LOC101163809	ENSORLP00000015051	ENSORLP00000017400	Ubiquitin-like domain-containing protein.	Cylindromatosis (turban tumor syndrome), b.	0.764
H2M970_ORYLA	LOC101167576	ENSORLP00000015051	ENSORLP00000038710	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.753
H2M970_ORYLA	LOC101167949	ENSORLP00000015051	ENSORLP00000042687	Ubiquitin-like domain-containing protein.	E3 ubiquitin-protein ligase.	0.749
H2M970_ORYLA	LOC101168074	ENSORLP00000015051	ENSORLP00000018072	Ubiquitin-like domain-containing protein.	Mitogen-activated protein kinase kinase kinase 20.	0.501
H2M970_ORYLA	LOC101168449	ENSORLP00000015051	ENSORLP00000036637	Ubiquitin-like domain-containing protein.	Cylindromatosis (turban tumor syndrome), like; Belongs to the peptidase C19 family.	0.764
H2M970_ORYLA	LOC101170318	ENSORLP00000015051	ENSORLP00000036122	Ubiquitin-like domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.910
H2M970_ORYLA	LOC101172600	ENSORLP00000015051	ENSORLP00000006992	Ubiquitin-like domain-containing protein.	Baculoviral IAP repeat containing 2.	0.612
H2M970_ORYLA	LOC101174746	ENSORLP00000015051	ENSORLP00000036289	Ubiquitin-like domain-containing protein.	E3 ubiquitin-protein ligase.	0.749
H2M970_ORYLA	LOC105356874	ENSORLP00000015051	ENSORLP00000044724	Ubiquitin-like domain-containing protein.	Protein kinase domain-containing protein.	0.520
H2M970_ORYLA	birc7	ENSORLP00000015051	ENSORLP00000035991	Ubiquitin-like domain-containing protein.	RING-type domain-containing protein.	0.612
H2M970_ORYLA	cyld	ENSORLP00000015051	ENSORLP00000017385	Ubiquitin-like domain-containing protein.	Cylindromatosis (turban tumor syndrome), a; Belongs to the peptidase C19 family.	0.764
H2M970_ORYLA	ikbkg	ENSORLP00000015051	ENSORLP00000002636	Ubiquitin-like domain-containing protein.	Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.	0.566
H2M970_ORYLA	map3k20	ENSORLP00000015051	ENSORLP00000021833	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.501
H2M970_ORYLA	map3k7	ENSORLP00000015051	ENSORLP00000027372	Ubiquitin-like domain-containing protein.	Mitogen-activated protein kinase kinase kinase 7.	0.520
H2M970_ORYLA	nod1	ENSORLP00000015051	ENSORLP00000004745	Ubiquitin-like domain-containing protein.	Nucleotide-binding oligomerization domain containing 1.	0.567
H2M970_ORYLA	rps27a	ENSORLP00000015051	ENSORLP00000038189	Ubiquitin-like domain-containing protein.	Ribosomal protein S27a.	0.992
H2M970_ORYLA	tab2	ENSORLP00000015051	ENSORLP00000030054	Ubiquitin-like domain-containing protein.	TGF-beta activated kinase 1 (MAP3K7) binding protein 2.	0.745