28 items (Oryzias latipes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	THAP1	THAP domain containing 1. (214 aa)
	prkacb	Uncharacterized protein; Belongs to the protein kinase superfamily. (380 aa)
	LOC101159995	Phosphodiesterase. (769 aa)
	ppp2cb	Serine/threonine-protein phosphatase. (309 aa)
	ENSORLP00000028344	Uncharacterized protein. (96 aa)
	LOC101168957	Protein phosphatase 1, regulatory (inhibitor) subunit 1B. (209 aa)
	pde4c	Phosphodiesterase. (792 aa)
	LOC101156228	Phosphodiesterase. (850 aa)
	LOC101173893	Phosphodiesterase. (749 aa)
	ENSORLP00000032225	Uncharacterized protein. (67 aa)
	LOC101163742	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily. (377 aa)
	pde4b	Phosphodiesterase. (754 aa)
	LOC101161266	Phosphodiesterase. (776 aa)
	ENSORLP00000039236	THAP-type domain-containing protein. (96 aa)
	LOC101170876	Uncharacterized protein; Belongs to the protein kinase superfamily. (354 aa)
	LOC101169945	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (330 aa)
	LOC101159349	Protein kinase, cAMP-dependent, regulatory, type II, alpha A. (391 aa)
	prkar1a	Protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) b. (380 aa)
	prkar2b	Protein kinase cAMP-dependent type II regulatory subunit beta. (409 aa)
	pde4d	Phosphodiesterase. (816 aa)
	LOC101171445	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (325 aa)
	LOC101167061	Protein phosphatase 2, regulatory subunit A, beta b. (589 aa)
	prkar1b	Protein kinase, cAMP-dependent, regulatory, type I, beta. (380 aa)
	LOC101160964	Uncharacterized protein; Belongs to the protein kinase superfamily. (359 aa)
	ppp1cc	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (323 aa)
	cdk5	Cyclin-dependent kinase 5; Belongs to the protein kinase superfamily. (292 aa)
	ppp2ca	Serine/threonine-protein phosphatase. (309 aa)
	H2MW65_ORYLA	Protein kinase, cAMP-dependent, regulatory, type II, alpha, B. (232 aa)

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSORLP00000028344	LOC101160964	ENSORLP00000028344	ENSORLP00000018527	Uncharacterized protein.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.489
ENSORLP00000028344	LOC101163742	ENSORLP00000028344	ENSORLP00000033579	Uncharacterized protein.	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.	0.489
ENSORLP00000028344	LOC101170876	ENSORLP00000028344	ENSORLP00000045423	Uncharacterized protein.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.489
ENSORLP00000028344	prkacb	ENSORLP00000028344	ENSORLP00000026566	Uncharacterized protein.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.489
ENSORLP00000032225	ENSORLP00000039236	ENSORLP00000032225	ENSORLP00000039236	Uncharacterized protein.	THAP-type domain-containing protein.	0.432
ENSORLP00000032225	LOC101160964	ENSORLP00000032225	ENSORLP00000018527	Uncharacterized protein.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.532
ENSORLP00000032225	LOC101163742	ENSORLP00000032225	ENSORLP00000033579	Uncharacterized protein.	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.	0.532
ENSORLP00000032225	LOC101169945	ENSORLP00000032225	ENSORLP00000002503	Uncharacterized protein.	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	0.491
ENSORLP00000032225	LOC101170876	ENSORLP00000032225	ENSORLP00000045423	Uncharacterized protein.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.532
ENSORLP00000032225	LOC101171445	ENSORLP00000032225	ENSORLP00000007368	Uncharacterized protein.	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	0.491
ENSORLP00000032225	THAP1	ENSORLP00000032225	ENSORLP00000023452	Uncharacterized protein.	THAP domain containing 1.	0.432
ENSORLP00000032225	cdk5	ENSORLP00000032225	ENSORLP00000021947	Uncharacterized protein.	Cyclin-dependent kinase 5; Belongs to the protein kinase superfamily.	0.731
ENSORLP00000032225	ppp1cc	ENSORLP00000032225	ENSORLP00000019963	Uncharacterized protein.	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	0.491
ENSORLP00000032225	prkacb	ENSORLP00000032225	ENSORLP00000026566	Uncharacterized protein.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.532
ENSORLP00000039236	ENSORLP00000032225	ENSORLP00000039236	ENSORLP00000032225	THAP-type domain-containing protein.	Uncharacterized protein.	0.432
ENSORLP00000039236	H2MW65_ORYLA	ENSORLP00000039236	ENSORLP00000023083	THAP-type domain-containing protein.	Protein kinase, cAMP-dependent, regulatory, type II, alpha, B.	0.725
ENSORLP00000039236	LOC101159349	ENSORLP00000039236	ENSORLP00000003822	THAP-type domain-containing protein.	Protein kinase, cAMP-dependent, regulatory, type II, alpha A.	0.725
ENSORLP00000039236	LOC101168957	ENSORLP00000039236	ENSORLP00000028672	THAP-type domain-containing protein.	Protein phosphatase 1, regulatory (inhibitor) subunit 1B.	0.432
ENSORLP00000039236	prkar1a	ENSORLP00000039236	ENSORLP00000004817	THAP-type domain-containing protein.	Protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) b.	0.725
ENSORLP00000039236	prkar1b	ENSORLP00000039236	ENSORLP00000010584	THAP-type domain-containing protein.	Protein kinase, cAMP-dependent, regulatory, type I, beta.	0.725