7 items (Oryzias latipes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101164480	Tyrosine-protein kinase. (551 aa)
	SRC	Tyrosine-protein kinase. (544 aa)
	fndc3b	Fibronectin type III domain containing 3Ba. (1209 aa)
	LOC101170140	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell. (392 aa)
	LOC101160233	Tight junction protein 1b; Belongs to the MAGUK family. (1856 aa)
	LOC101166369	Tight junction protein 1a; Belongs to the MAGUK family. (1748 aa)
	fndc3a	Fibronectin type III domain containing 3A. (1244 aa)

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101160233	LOC101164480	ENSORLP00000027536	ENSORLP00000036233	Tight junction protein 1b; Belongs to the MAGUK family.	Tyrosine-protein kinase.	0.930
LOC101160233	LOC101166369	ENSORLP00000027536	ENSORLP00000029048	Tight junction protein 1b; Belongs to the MAGUK family.	Tight junction protein 1a; Belongs to the MAGUK family.	0.903
LOC101160233	LOC101170140	ENSORLP00000027536	ENSORLP00000019386	Tight junction protein 1b; Belongs to the MAGUK family.	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	0.990
LOC101160233	SRC	ENSORLP00000027536	ENSORLP00000008431	Tight junction protein 1b; Belongs to the MAGUK family.	Tyrosine-protein kinase.	0.930
LOC101164480	LOC101160233	ENSORLP00000036233	ENSORLP00000027536	Tyrosine-protein kinase.	Tight junction protein 1b; Belongs to the MAGUK family.	0.930
LOC101164480	LOC101166369	ENSORLP00000036233	ENSORLP00000029048	Tyrosine-protein kinase.	Tight junction protein 1a; Belongs to the MAGUK family.	0.930
LOC101164480	LOC101170140	ENSORLP00000036233	ENSORLP00000019386	Tyrosine-protein kinase.	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	0.627
LOC101164480	SRC	ENSORLP00000036233	ENSORLP00000008431	Tyrosine-protein kinase.	Tyrosine-protein kinase.	0.900
LOC101166369	LOC101160233	ENSORLP00000029048	ENSORLP00000027536	Tight junction protein 1a; Belongs to the MAGUK family.	Tight junction protein 1b; Belongs to the MAGUK family.	0.903
LOC101166369	LOC101164480	ENSORLP00000029048	ENSORLP00000036233	Tight junction protein 1a; Belongs to the MAGUK family.	Tyrosine-protein kinase.	0.930
LOC101166369	LOC101170140	ENSORLP00000029048	ENSORLP00000019386	Tight junction protein 1a; Belongs to the MAGUK family.	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	0.990
LOC101166369	SRC	ENSORLP00000029048	ENSORLP00000008431	Tight junction protein 1a; Belongs to the MAGUK family.	Tyrosine-protein kinase.	0.930
LOC101170140	LOC101160233	ENSORLP00000019386	ENSORLP00000027536	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Tight junction protein 1b; Belongs to the MAGUK family.	0.990
LOC101170140	LOC101164480	ENSORLP00000019386	ENSORLP00000036233	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Tyrosine-protein kinase.	0.627
LOC101170140	LOC101166369	ENSORLP00000019386	ENSORLP00000029048	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Tight junction protein 1a; Belongs to the MAGUK family.	0.990
LOC101170140	SRC	ENSORLP00000019386	ENSORLP00000008431	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	Tyrosine-protein kinase.	0.627
SRC	LOC101160233	ENSORLP00000008431	ENSORLP00000027536	Tyrosine-protein kinase.	Tight junction protein 1b; Belongs to the MAGUK family.	0.930
SRC	LOC101164480	ENSORLP00000008431	ENSORLP00000036233	Tyrosine-protein kinase.	Tyrosine-protein kinase.	0.900
SRC	LOC101166369	ENSORLP00000008431	ENSORLP00000029048	Tyrosine-protein kinase.	Tight junction protein 1a; Belongs to the MAGUK family.	0.930
SRC	LOC101170140	ENSORLP00000008431	ENSORLP00000019386	Tyrosine-protein kinase.	Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.	0.627