(20 nodes) Vitamin B5 (pantothenate) metabolism network (Oryzias latipes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H2LKX7_ORYLA	Dynein light chain. (110 aa)
	dcakd	Dephospho-CoA kinase domain containing. (229 aa)
	aasdhppt	Aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase. (296 aa)
	LOC101169644	Si:dkey-61p9.11. (2090 aa)
	olpks	Carrier domain-containing protein. (2051 aa)
	H2MEE3_ORYLA	Carrier domain-containing protein. (524 aa)
	coasy	CoA synthase. (566 aa)
	LOC101167595	Solute carrier family 5 member 6a; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (656 aa)
	slc25a16	Solute carrier family 25 member 16; Belongs to the mitochondrial carrier (TC 2.A.29) family. (308 aa)
	ENSORLP00000031316	Uncharacterized protein. (171 aa)
	ENSORLP00000032994	Dynein light chain. (96 aa)
	ppcdc	Phosphopantothenoylcysteine decarboxylase. (243 aa)
	ENSORLP00000042959	Dynein light chain. (91 aa)
	LOC101161204	Pantothenate kinase 2. (427 aa)
	LOC101168178	Solute carrier family 5 member 6; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (616 aa)
	pank4	Pantothenate kinase. (769 aa)
	ppcs	Phosphopantothenoylcysteine synthetase. (321 aa)
	LOC101175261	Pantothenate kinase 1a. (452 aa)
	LOC101170716	Carrier domain-containing protein. (2203 aa)
	pdzd11	PDZ domain containing 11. (142 aa)

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSORLP00000031316	coasy	ENSORLP00000031316	ENSORLP00000026351	Uncharacterized protein.	CoA synthase.	0.688
ENSORLP00000031316	ppcdc	ENSORLP00000031316	ENSORLP00000040598	Uncharacterized protein.	Phosphopantothenoylcysteine decarboxylase.	0.569
ENSORLP00000031316	ppcs	ENSORLP00000031316	ENSORLP00000005002	Uncharacterized protein.	Phosphopantothenoylcysteine synthetase.	0.569
H2MEE3_ORYLA	aasdhppt	ENSORLP00000016949	ENSORLP00000013208	Carrier domain-containing protein.	Aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase.	0.889
LOC101161204	LOC101175261	ENSORLP00000043686	ENSORLP00000004788	Pantothenate kinase 2.	Pantothenate kinase 1a.	0.901
LOC101161204	coasy	ENSORLP00000043686	ENSORLP00000026351	Pantothenate kinase 2.	CoA synthase.	0.967
LOC101161204	dcakd	ENSORLP00000043686	ENSORLP00000010617	Pantothenate kinase 2.	Dephospho-CoA kinase domain containing.	0.475
LOC101161204	ppcdc	ENSORLP00000043686	ENSORLP00000040598	Pantothenate kinase 2.	Phosphopantothenoylcysteine decarboxylase.	0.693
LOC101161204	ppcs	ENSORLP00000043686	ENSORLP00000005002	Pantothenate kinase 2.	Phosphopantothenoylcysteine synthetase.	0.969
LOC101167595	pdzd11	ENSORLP00000028291	ENSORLP00000002326	Solute carrier family 5 member 6a; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.	PDZ domain containing 11.	0.711
LOC101168178	pdzd11	ENSORLP00000044346	ENSORLP00000002326	Solute carrier family 5 member 6; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.	PDZ domain containing 11.	0.711
LOC101169644	aasdhppt	ENSORLP00000016010	ENSORLP00000013208	Si:dkey-61p9.11.	Aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase.	0.889
LOC101170716	aasdhppt	ENSORLP00000004541	ENSORLP00000013208	Carrier domain-containing protein.	Aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase.	0.889
LOC101175261	LOC101161204	ENSORLP00000004788	ENSORLP00000043686	Pantothenate kinase 1a.	Pantothenate kinase 2.	0.901
LOC101175261	coasy	ENSORLP00000004788	ENSORLP00000026351	Pantothenate kinase 1a.	CoA synthase.	0.967
LOC101175261	dcakd	ENSORLP00000004788	ENSORLP00000010617	Pantothenate kinase 1a.	Dephospho-CoA kinase domain containing.	0.475
LOC101175261	ppcdc	ENSORLP00000004788	ENSORLP00000040598	Pantothenate kinase 1a.	Phosphopantothenoylcysteine decarboxylase.	0.693
LOC101175261	ppcs	ENSORLP00000004788	ENSORLP00000005002	Pantothenate kinase 1a.	Phosphopantothenoylcysteine synthetase.	0.969
aasdhppt	H2MEE3_ORYLA	ENSORLP00000013208	ENSORLP00000016949	Aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase.	Carrier domain-containing protein.	0.889
aasdhppt	LOC101169644	ENSORLP00000013208	ENSORLP00000016010	Aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase.	Si:dkey-61p9.11.	0.889