16 items (Oryzias latipes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101160355	Deltex 4, E3 ubiquitin ligase a. (772 aa)
	LOC101174746	E3 ubiquitin-protein ligase. (877 aa)
	rps27a	Ribosomal protein S27a. (195 aa)
	LOC101168729	Deltex 2, E3 ubiquitin ligase. (634 aa)
	LOC101163297	Uncharacterized protein. (751 aa)
	neurl1b	Neuralized E3 ubiquitin protein ligase 1B. (594 aa)
	DTX1	Deltex E3 ubiquitin ligase 1. (640 aa)
	DLK1	Delta like non-canonical Notch ligand 1. (394 aa)
	LOC101171596	Notch receptor 1a. (2476 aa)
	LOC101167949	E3 ubiquitin-protein ligase. (879 aa)
	notch1	Notch receptor 1b. (2507 aa)
	LOC101171274	Uncharacterized protein. (571 aa)
	dner	Delta/notch-like EGF repeat containing. (757 aa)
	ubc	Ubiquitin B. (782 aa)
	LOC101166281	Neuralized E3 ubiquitin protein ligase 1Aa. (591 aa)
	mib1	Mindbomb E3 ubiquitin protein ligase 1. (1081 aa)

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DLK1	LOC101171596	ENSORLP00000041681	ENSORLP00000042502	Delta like non-canonical Notch ligand 1.	Notch receptor 1a.	0.702
DLK1	notch1	ENSORLP00000041681	ENSORLP00000000793	Delta like non-canonical Notch ligand 1.	Notch receptor 1b.	0.706
DTX1	LOC101167949	ENSORLP00000041295	ENSORLP00000042687	Deltex E3 ubiquitin ligase 1.	E3 ubiquitin-protein ligase.	0.627
DTX1	LOC101171596	ENSORLP00000041295	ENSORLP00000042502	Deltex E3 ubiquitin ligase 1.	Notch receptor 1a.	0.814
DTX1	LOC101174746	ENSORLP00000041295	ENSORLP00000036289	Deltex E3 ubiquitin ligase 1.	E3 ubiquitin-protein ligase.	0.627
DTX1	notch1	ENSORLP00000041295	ENSORLP00000000793	Deltex E3 ubiquitin ligase 1.	Notch receptor 1b.	0.814
DTX1	rps27a	ENSORLP00000041295	ENSORLP00000038189	Deltex E3 ubiquitin ligase 1.	Ribosomal protein S27a.	0.593
DTX1	ubc	ENSORLP00000041295	ENSORLP00000015065	Deltex E3 ubiquitin ligase 1.	Ubiquitin B.	0.575
LOC101160355	LOC101167949	ENSORLP00000030926	ENSORLP00000042687	Deltex 4, E3 ubiquitin ligase a.	E3 ubiquitin-protein ligase.	0.627
LOC101160355	LOC101171596	ENSORLP00000030926	ENSORLP00000042502	Deltex 4, E3 ubiquitin ligase a.	Notch receptor 1a.	0.809
LOC101160355	LOC101174746	ENSORLP00000030926	ENSORLP00000036289	Deltex 4, E3 ubiquitin ligase a.	E3 ubiquitin-protein ligase.	0.627
LOC101160355	notch1	ENSORLP00000030926	ENSORLP00000000793	Deltex 4, E3 ubiquitin ligase a.	Notch receptor 1b.	0.809
LOC101160355	rps27a	ENSORLP00000030926	ENSORLP00000038189	Deltex 4, E3 ubiquitin ligase a.	Ribosomal protein S27a.	0.593
LOC101160355	ubc	ENSORLP00000030926	ENSORLP00000015065	Deltex 4, E3 ubiquitin ligase a.	Ubiquitin B.	0.562
LOC101163297	LOC101167949	ENSORLP00000038722	ENSORLP00000042687	Uncharacterized protein.	E3 ubiquitin-protein ligase.	0.627
LOC101163297	LOC101171596	ENSORLP00000038722	ENSORLP00000042502	Uncharacterized protein.	Notch receptor 1a.	0.809
LOC101163297	LOC101174746	ENSORLP00000038722	ENSORLP00000036289	Uncharacterized protein.	E3 ubiquitin-protein ligase.	0.627
LOC101163297	notch1	ENSORLP00000038722	ENSORLP00000000793	Uncharacterized protein.	Notch receptor 1b.	0.809
LOC101163297	rps27a	ENSORLP00000038722	ENSORLP00000038189	Uncharacterized protein.	Ribosomal protein S27a.	0.593
LOC101163297	ubc	ENSORLP00000038722	ENSORLP00000015065	Uncharacterized protein.	Ubiquitin B.	0.562