56 items (Oryzias latipes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101174684	Solute carrier organic anion transporter family member. (701 aa)
	SLCO5A1	Solute carrier organic anion transporter family member. (861 aa)
	LOC101172075	Solute carrier organic anion transporter family member. (703 aa)
	LOC101173674	Solute carrier organic anion transporter family member. (677 aa)
	SLCO1C1	Solute carrier organic anion transporter family member. (656 aa)
	LOC101155944	Retinol binding protein 4, like; Belongs to the calycin superfamily. Lipocalin family. (227 aa)
	lcn2	Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family. (189 aa)
	LOC101156919	Solute carrier family 35 member D1b. (344 aa)
	SLC29A2	Solute carrier family 29 member 2. (474 aa)
	slc35a1	Uncharacterized protein. (338 aa)
	slc29a3	Solute carrier family 29 member 3. (470 aa)
	slc33a1	Solute carrier family 33 member 1. (548 aa)
	LOC101160577	Solute carrier organic anion transporter family member. (644 aa)
	slc35a5	Solute carrier family 35 member A5. (426 aa)
	slc29a4	Solute carrier family 29 member 4. (603 aa)
	arl2bp	ADP-ribosylation factor-like 2 binding protein. (173 aa)
	LOC101167075	Apolipoprotein Da, duplicate 1; Belongs to the calycin superfamily. Lipocalin family. (186 aa)
	slc27a6	Solute carrier family 27 member 6. (642 aa)
	LOC101167595	Solute carrier family 5 member 6a; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (656 aa)
	slc35a3	Solute carrier family 35 member A3a. (284 aa)
	slc28a1	Sodium/nucleoside cotransporter; Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family. (655 aa)
	LOC101166755	Prostaglandin D2 synthase b, tandem duplicate 1; Belongs to the calycin superfamily. Lipocalin family. (183 aa)
	LOC101165396	Solute carrier family 27 member 1a. (648 aa)
	LOC101165663	Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family. (198 aa)
	slc35b3	Solute carrier family 35 member B3. (374 aa)
	LOC101157643	Solute carrier organic anion transporter family member. (885 aa)
	SLC28A3	Sodium/nucleoside cotransporter; Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family. (623 aa)
	LOC101157322	Uncharacterized protein. (335 aa)
	LOC101174678	Uncharacterized protein. (537 aa)
	LOC101163991	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (298 aa)
	LOC101171421	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (298 aa)
	tmem241	Uncharacterized protein. (299 aa)
	LOC101170718	Apolipoprotein Db; Belongs to the calycin superfamily. Lipocalin family. (232 aa)
	LOC101170232	Apolipoprotein Db; Belongs to the calycin superfamily. Lipocalin family. (195 aa)
	LOC101174399	Uncharacterized protein. (446 aa)
	slc35d1	Solute carrier family 35 member D1a. (352 aa)
	SLCO3A1	Solute carrier organic anion transporter family member. (700 aa)
	slc35b2	Solute carrier family 35 member B2. (432 aa)
	SLC35D3	Solute carrier family 35 member D3. (444 aa)
	slc35a2	Solute carrier family 35 member 2. (375 aa)
	slc35c1	Solute carrier family 35 member C1. (387 aa)
	mfsd3	Major facilitator superfamily domain containing 3. (421 aa)
	SLC35A4	Solute carrier family 35 member A4. (325 aa)
	LOC101170475	Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family. (252 aa)
	slc29a1	Solute carrier family 29 member 1a. (448 aa)
	slco2a1	Solute carrier organic anion transporter family member. (625 aa)
	pdzd11	PDZ domain containing 11. (142 aa)
	slc35b4	Solute carrier family 35 member B4. (330 aa)
	LOC101160739	Isotocin; Belongs to the vasopressin/oxytocin family. (155 aa)
	LOC101163088	Solute carrier family 35 member D2. (335 aa)
	LOC101163599	Si:ch211-248a14.8. (311 aa)
	slc27a4	Solute carrier family 27 member 4. (645 aa)
	arl2	ADP-ribosylation factor-like 2; Belongs to the small GTPase superfamily. Arf family. (184 aa)
	oxt	Uncharacterized protein; Belongs to the vasopressin/oxytocin family. (168 aa)
	slco4a1	Solute carrier organic anion transporter family member. (772 aa)
	LOC101168178	Solute carrier family 5 member 6; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (616 aa)

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101156919	slc35b2	ENSORLP00000013479	ENSORLP00000034594	Solute carrier family 35 member D1b.	Solute carrier family 35 member B2.	0.415
LOC101156919	slc35b4	ENSORLP00000013479	ENSORLP00000004734	Solute carrier family 35 member D1b.	Solute carrier family 35 member B4.	0.415
LOC101156919	slc35c1	ENSORLP00000013479	ENSORLP00000037420	Solute carrier family 35 member D1b.	Solute carrier family 35 member C1.	0.409
LOC101157643	LOC101174678	ENSORLP00000007818	ENSORLP00000029246	Solute carrier organic anion transporter family member.	Uncharacterized protein.	0.465
LOC101160739	oxt	ENSORLP00000004742	ENSORLP00000043817	Isotocin; Belongs to the vasopressin/oxytocin family.	Uncharacterized protein; Belongs to the vasopressin/oxytocin family.	0.626
LOC101163088	slc35b2	ENSORLP00000004888	ENSORLP00000034594	Solute carrier family 35 member D2.	Solute carrier family 35 member B2.	0.415
LOC101163088	slc35b4	ENSORLP00000004888	ENSORLP00000004734	Solute carrier family 35 member D2.	Solute carrier family 35 member B4.	0.415
LOC101163088	slc35c1	ENSORLP00000004888	ENSORLP00000037420	Solute carrier family 35 member D2.	Solute carrier family 35 member C1.	0.409
LOC101163599	slc35b4	ENSORLP00000040053	ENSORLP00000004734	Si:ch211-248a14.8.	Solute carrier family 35 member B4.	0.402
LOC101163991	LOC101171421	ENSORLP00000029274	ENSORLP00000030127	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.901
LOC101163991	arl2bp	ENSORLP00000029274	ENSORLP00000019429	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	ADP-ribosylation factor-like 2 binding protein.	0.490
LOC101165396	slc27a4	ENSORLP00000008407	ENSORLP00000042096	Solute carrier family 27 member 1a.	Solute carrier family 27 member 4.	0.911
LOC101165663	LOC101166755	ENSORLP00000008312	ENSORLP00000008961	Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family.	Prostaglandin D2 synthase b, tandem duplicate 1; Belongs to the calycin superfamily. Lipocalin family.	0.908
LOC101166755	LOC101165663	ENSORLP00000008961	ENSORLP00000008312	Prostaglandin D2 synthase b, tandem duplicate 1; Belongs to the calycin superfamily. Lipocalin family.	Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family.	0.908
LOC101167595	pdzd11	ENSORLP00000028291	ENSORLP00000002326	Solute carrier family 5 member 6a; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.	PDZ domain containing 11.	0.711
LOC101168178	pdzd11	ENSORLP00000044346	ENSORLP00000002326	Solute carrier family 5 member 6; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.	PDZ domain containing 11.	0.711
LOC101171421	LOC101163991	ENSORLP00000030127	ENSORLP00000029274	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.901
LOC101171421	arl2bp	ENSORLP00000030127	ENSORLP00000019429	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	ADP-ribosylation factor-like 2 binding protein.	0.490
LOC101173674	LOC101174678	ENSORLP00000010971	ENSORLP00000029246	Solute carrier organic anion transporter family member.	Uncharacterized protein.	0.477
LOC101174678	LOC101157643	ENSORLP00000029246	ENSORLP00000007818	Uncharacterized protein.	Solute carrier organic anion transporter family member.	0.465