23 items (Oryzias latipes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101159590	Platelet/endothelial cell adhesion molecule 1. (793 aa)
	LOC101172160	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. (594 aa)
	ppp2ca	Serine/threonine-protein phosphatase. (309 aa)
	LOC101156223	Si:dkey-237i9.8. (782 aa)
	ppp2r5b	Serine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit. (520 aa)
	LOC101167061	Protein phosphatase 2, regulatory subunit A, beta b. (589 aa)
	pla2g4a	Phospholipase A2. (745 aa)
	LOC101167610	Low density lipoprotein receptor-related protein 8, apolipoprotein e receptor. (975 aa)
	LOC101155365	Tyrosine-protein kinase. (529 aa)
	ppp2r5a	Serine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit. (509 aa)
	ptpn6	Protein tyrosine phosphatase non-receptor type 6. (582 aa)
	H2MBB3_ORYLA	Vitellogenin domain-containing protein. (793 aa)
	LOC101158990	Apolipoprotein Bb, tandem duplicate 2. (2459 aa)
	LOC101173107	Serine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit. (478 aa)
	H2MX42_ORYLA	Zgc:171775. (273 aa)
	LOC101169753	Serine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit. (609 aa)
	LOC101160731	Mitogen-activated protein kinase. (360 aa)
	ppp2cb	Serine/threonine-protein phosphatase. (309 aa)
	LOC101162042	Mitogen-activated protein kinase. (361 aa)
	ppp2r5d	Serine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit. (597 aa)
	ptpn11	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. (596 aa)
	PPP2R5C	Serine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit. (567 aa)
	LOC101156458	Apolipoprotein Ba. (4366 aa)

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H2MBB3_ORYLA	LOC101156223	ENSORLP00000015834	ENSORLP00000002122	Vitellogenin domain-containing protein.	Si:dkey-237i9.8.	0.499
H2MBB3_ORYLA	LOC101156458	ENSORLP00000015834	ENSORLP00000041747	Vitellogenin domain-containing protein.	Apolipoprotein Ba.	0.562
H2MBB3_ORYLA	LOC101158990	ENSORLP00000015834	ENSORLP00000015852	Vitellogenin domain-containing protein.	Apolipoprotein Bb, tandem duplicate 2.	0.555
H2MBB3_ORYLA	LOC101159590	ENSORLP00000015834	ENSORLP00000015470	Vitellogenin domain-containing protein.	Platelet/endothelial cell adhesion molecule 1.	0.499
H2MBB3_ORYLA	LOC101167610	ENSORLP00000015834	ENSORLP00000013246	Vitellogenin domain-containing protein.	Low density lipoprotein receptor-related protein 8, apolipoprotein e receptor.	0.447
H2MBB3_ORYLA	LOC101172160	ENSORLP00000015834	ENSORLP00000000761	Vitellogenin domain-containing protein.	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	0.431
H2MBB3_ORYLA	ppp2r5b	ENSORLP00000015834	ENSORLP00000006988	Vitellogenin domain-containing protein.	Serine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit.	0.478
H2MBB3_ORYLA	ptpn11	ENSORLP00000015834	ENSORLP00000039210	Vitellogenin domain-containing protein.	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	0.431
H2MBB3_ORYLA	ptpn6	ENSORLP00000015834	ENSORLP00000015555	Vitellogenin domain-containing protein.	Protein tyrosine phosphatase non-receptor type 6.	0.431
H2MX42_ORYLA	LOC101155365	ENSORLP00000023483	ENSORLP00000013903	Zgc:171775.	Tyrosine-protein kinase.	0.415
H2MX42_ORYLA	LOC101167061	ENSORLP00000023483	ENSORLP00000009339	Zgc:171775.	Protein phosphatase 2, regulatory subunit A, beta b.	0.434
H2MX42_ORYLA	pla2g4a	ENSORLP00000023483	ENSORLP00000011881	Zgc:171775.	Phospholipase A2.	0.659
H2MX42_ORYLA	ppp2ca	ENSORLP00000023483	ENSORLP00000001162	Zgc:171775.	Serine/threonine-protein phosphatase.	0.480
H2MX42_ORYLA	ppp2cb	ENSORLP00000023483	ENSORLP00000027862	Zgc:171775.	Serine/threonine-protein phosphatase.	0.480
LOC101155365	H2MX42_ORYLA	ENSORLP00000013903	ENSORLP00000023483	Tyrosine-protein kinase.	Zgc:171775.	0.415
LOC101155365	LOC101156223	ENSORLP00000013903	ENSORLP00000002122	Tyrosine-protein kinase.	Si:dkey-237i9.8.	0.444
LOC101155365	LOC101159590	ENSORLP00000013903	ENSORLP00000015470	Tyrosine-protein kinase.	Platelet/endothelial cell adhesion molecule 1.	0.440
LOC101155365	LOC101160731	ENSORLP00000013903	ENSORLP00000027025	Tyrosine-protein kinase.	Mitogen-activated protein kinase.	0.415
LOC101155365	LOC101162042	ENSORLP00000013903	ENSORLP00000035635	Tyrosine-protein kinase.	Mitogen-activated protein kinase.	0.415
LOC101155365	LOC101167061	ENSORLP00000013903	ENSORLP00000009339	Tyrosine-protein kinase.	Protein phosphatase 2, regulatory subunit A, beta b.	0.404