STRINGSTRING
traf6 traf6 ikbkg ikbkg nod1 nod1 LOC101157952 LOC101157952 ripk2 ripk2 uba52 uba52 kxd1 kxd1 tab1 tab1 ube2n ube2n H2M970_ORYLA H2M970_ORYLA ubc ubc LOC101168074 LOC101168074 map3k20 map3k20 LOC101164997 LOC101164997 tab3 tab3 map3k7 map3k7 LOC101168799 LOC101168799 map2k4 map2k4 tab2 tab2 map2k7 map2k7 LOC101170318 LOC101170318 LOC101161098 LOC101161098 rps27a rps27a LOC101166698 LOC101166698 LOC101158978 LOC101158978 LOC105356874 LOC105356874
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
traf6TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (569 aa)
ikbkgInhibitor of nuclear factor kappa B kinase regulatory subunit gamma. (585 aa)
nod1Nucleotide-binding oligomerization domain containing 1. (938 aa)
LOC101157952Mitogen-activated protein kinase. (420 aa)
ripk2Receptor-interacting serine-threonine kinase 2. (590 aa)
uba52Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
kxd1KxDL motif containing 1. (184 aa)
tab1TGF-beta activated kinase 1/MAP3K7 binding protein 1. (504 aa)
ube2nUbiquitin-conjugating enzyme E2Nb; Belongs to the ubiquitin-conjugating enzyme family. (154 aa)
H2M970_ORYLAUbiquitin-like domain-containing protein. (129 aa)
ubcUbiquitin B. (782 aa)
LOC101168074Mitogen-activated protein kinase kinase kinase 20. (666 aa)
map3k20Uncharacterized protein. (802 aa)
LOC101164997Mitogen-activated protein kinase. (384 aa)
tab3TGF-beta activated kinase 1 (MAP3K7) binding protein 3. (610 aa)
map3k7Mitogen-activated protein kinase kinase kinase 7. (595 aa)
LOC101168799Mitogen-activated protein kinase. (488 aa)
map2k4Mitogen-activated protein kinase kinase 4; Belongs to the protein kinase superfamily. (428 aa)
tab2TGF-beta activated kinase 1 (MAP3K7) binding protein 2. (733 aa)
map2k7Mitogen-activated protein kinase kinase 7. (477 aa)
LOC101170318UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (153 aa)
LOC101161098Mitogen-activated protein kinase kinase 4b; Belongs to the protein kinase superfamily. (463 aa)
rps27aRibosomal protein S27a. (195 aa)
LOC101166698Protein kinase domain-containing protein. (721 aa)
LOC101158978Mitogen-activated protein kinase. (422 aa)
LOC105356874Protein kinase domain-containing protein. (501 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.