51 items (Oryzias latipes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101165167	High mobility group box 1a. (206 aa)
	LOC101163430	Interferon regulatory factor. (293 aa)
	LOC101167979	Uncharacterized protein. (426 aa)
	LOC101155367	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (596 aa)
	LOC101169661	Pellino E3 ubiquitin protein ligase 1. (441 aa)
	LOC101156596	High mobility group box 1b. (194 aa)
	LOC101168213	BCL2 associated X, apoptosis regulator a. (188 aa)
	LOC101174276	Uncharacterized protein. (483 aa)
	CDC37	Cell division cycle 37 homolog (S. cerevisiae). (369 aa)
	LOC101172600	Baculoviral IAP repeat containing 2. (707 aa)
	gsdme	Gasdermin Eb. (499 aa)
	uba52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
	irf2	Interferon regulatory factor. (320 aa)
	LOC101168078	Receptor-interacting serine-threonine kinase 3; Belongs to the protein kinase superfamily. (481 aa)
	H2M2N2_ORYLA	Uncharacterized protein. (150 aa)
	kxd1	KxDL motif containing 1. (184 aa)
	casp8	Uncharacterized protein; Belongs to the peptidase C14A family. (481 aa)
	pdcd6ip	Programmed cell death 6 interacting protein. (882 aa)
	tnfsf10	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family. (281 aa)
	LOC101169506	Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2. (730 aa)
	H2M970_ORYLA	Ubiquitin-like domain-containing protein. (129 aa)
	ubc	Ubiquitin B. (782 aa)
	LOC101172365	TNF superfamily member 10; Belongs to the tumor necrosis factor family. (280 aa)
	chmp2b	Charged multivesicular body protein 2Bb. (215 aa)
	cflar	FLICE-like inhibitory protein; Belongs to the peptidase C14A family. (460 aa)
	LOC101167626	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (569 aa)
	LOC101171965	Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. (104 aa)
	LOC101158094	Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family. (251 aa)
	LOC101160750	Protein kinase domain-containing protein. (460 aa)
	ripk1	Receptor (TNFRSF)-interacting serine-threonine kinase 1, like. (675 aa)
	LOC105357520	IRF tryptophan pentad repeat domain-containing protein. (257 aa)
	LOC101159115	Uncharacterized protein. (205 aa)
	ogt	O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1. (1038 aa)
	LOC101168038	Protein kinase domain-containing protein. (509 aa)
	LOC101168285	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (415 aa)
	ENSORLP00000032097	Uncharacterized protein. (189 aa)
	LOC101172833	Tumor necrosis factor receptor superfamily, member a. (447 aa)
	birc7	RING-type domain-containing protein. (399 aa)
	LOC101169209	Uncharacterized protein. (283 aa)
	rps27a	Ribosomal protein S27a. (195 aa)
	fas	Uncharacterized protein. (310 aa)
	LOC101166883	X-linked inhibitor of apoptosis. (408 aa)
	LOC101168687	Zgc:153993. (293 aa)
	LOC101159737	Fas ligand (TNF superfamily, member 6); Belongs to the tumor necrosis factor family. (269 aa)
	tradd	Tnfrsf1a-associated via death domain. (321 aa)
	stub1	STIP1 homology and U-Box containing protein 1. (284 aa)
	fadd	Uncharacterized protein. (192 aa)
	LOC101157849	Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family. (289 aa)
	LOC101173230	Uncharacterized protein. (340 aa)
	prkn	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. (466 aa)
	LOC101165110	Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. (105 aa)

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDC37	LOC101168038	ENSORLP00000006979	ENSORLP00000029474	Cell division cycle 37 homolog (S. cerevisiae).	Protein kinase domain-containing protein.	0.472
CDC37	LOC101168078	ENSORLP00000006979	ENSORLP00000011349	Cell division cycle 37 homolog (S. cerevisiae).	Receptor-interacting serine-threonine kinase 3; Belongs to the protein kinase superfamily.	0.472
CDC37	LOC101168285	ENSORLP00000006979	ENSORLP00000029843	Cell division cycle 37 homolog (S. cerevisiae).	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.472
CDC37	LOC101169506	ENSORLP00000006979	ENSORLP00000014900	Cell division cycle 37 homolog (S. cerevisiae).	Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2.	0.935
CDC37	ripk1	ENSORLP00000006979	ENSORLP00000026458	Cell division cycle 37 homolog (S. cerevisiae).	Receptor (TNFRSF)-interacting serine-threonine kinase 1, like.	0.414
CDC37	rps27a	ENSORLP00000006979	ENSORLP00000038189	Cell division cycle 37 homolog (S. cerevisiae).	Ribosomal protein S27a.	0.586
CDC37	stub1	ENSORLP00000006979	ENSORLP00000043284	Cell division cycle 37 homolog (S. cerevisiae).	STIP1 homology and U-Box containing protein 1.	0.628
CDC37	ubc	ENSORLP00000006979	ENSORLP00000015065	Cell division cycle 37 homolog (S. cerevisiae).	Ubiquitin B.	0.610
ENSORLP00000032097	H2M970_ORYLA	ENSORLP00000032097	ENSORLP00000015051	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.649
ENSORLP00000032097	LOC101155367	ENSORLP00000032097	ENSORLP00000003220	Uncharacterized protein.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.683
ENSORLP00000032097	LOC101165110	ENSORLP00000032097	ENSORLP00000045850	Uncharacterized protein.	Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	0.636
ENSORLP00000032097	LOC101167626	ENSORLP00000032097	ENSORLP00000020860	Uncharacterized protein.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.683
ENSORLP00000032097	LOC101171965	ENSORLP00000032097	ENSORLP00000023224	Uncharacterized protein.	Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	0.636
ENSORLP00000032097	LOC101172600	ENSORLP00000032097	ENSORLP00000006992	Uncharacterized protein.	Baculoviral IAP repeat containing 2.	0.736
ENSORLP00000032097	birc7	ENSORLP00000032097	ENSORLP00000035991	Uncharacterized protein.	RING-type domain-containing protein.	0.736
ENSORLP00000032097	casp8	ENSORLP00000032097	ENSORLP00000014046	Uncharacterized protein.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.631
ENSORLP00000032097	cflar	ENSORLP00000032097	ENSORLP00000020363	Uncharacterized protein.	FLICE-like inhibitory protein; Belongs to the peptidase C14A family.	0.621
ENSORLP00000032097	fadd	ENSORLP00000032097	ENSORLP00000043356	Uncharacterized protein.	Uncharacterized protein.	0.479
ENSORLP00000032097	ripk1	ENSORLP00000032097	ENSORLP00000026458	Uncharacterized protein.	Receptor (TNFRSF)-interacting serine-threonine kinase 1, like.	0.734
ENSORLP00000032097	rps27a	ENSORLP00000032097	ENSORLP00000038189	Uncharacterized protein.	Ribosomal protein S27a.	0.796