STRINGSTRING
LOC101165167 LOC101165167 LOC101163430 LOC101163430 LOC101167979 LOC101167979 LOC101155367 LOC101155367 LOC101169661 LOC101169661 LOC101156596 LOC101156596 LOC101168213 LOC101168213 LOC101174276 LOC101174276 CDC37 CDC37 LOC101172600 LOC101172600 gsdme gsdme uba52 uba52 irf2 irf2 LOC101168078 LOC101168078 H2M2N2_ORYLA H2M2N2_ORYLA kxd1 kxd1 casp8 casp8 pdcd6ip pdcd6ip tnfsf10 tnfsf10 LOC101169506 LOC101169506 H2M970_ORYLA H2M970_ORYLA ubc ubc LOC101172365 LOC101172365 chmp2b chmp2b cflar cflar LOC101167626 LOC101167626 LOC101171965 LOC101171965 LOC101158094 LOC101158094 LOC101160750 LOC101160750 ripk1 ripk1 LOC105357520 LOC105357520 LOC101159115 LOC101159115 ogt ogt LOC101168038 LOC101168038 LOC101168285 LOC101168285 ENSORLP00000032097 ENSORLP00000032097 LOC101172833 LOC101172833 birc7 birc7 LOC101169209 LOC101169209 rps27a rps27a fas fas LOC101166883 LOC101166883 LOC101168687 LOC101168687 LOC101159737 LOC101159737 tradd tradd stub1 stub1 fadd fadd LOC101157849 LOC101157849 LOC101173230 LOC101173230 prkn prkn LOC101165110 LOC101165110
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC101165167High mobility group box 1a. (206 aa)
LOC101163430Interferon regulatory factor. (293 aa)
LOC101167979Uncharacterized protein. (426 aa)
LOC101155367TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (596 aa)
LOC101169661Pellino E3 ubiquitin protein ligase 1. (441 aa)
LOC101156596High mobility group box 1b. (194 aa)
LOC101168213BCL2 associated X, apoptosis regulator a. (188 aa)
LOC101174276Uncharacterized protein. (483 aa)
CDC37Cell division cycle 37 homolog (S. cerevisiae). (369 aa)
LOC101172600Baculoviral IAP repeat containing 2. (707 aa)
gsdmeGasdermin Eb. (499 aa)
uba52Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
irf2Interferon regulatory factor. (320 aa)
LOC101168078Receptor-interacting serine-threonine kinase 3; Belongs to the protein kinase superfamily. (481 aa)
H2M2N2_ORYLAUncharacterized protein. (150 aa)
kxd1KxDL motif containing 1. (184 aa)
casp8Uncharacterized protein; Belongs to the peptidase C14A family. (481 aa)
pdcd6ipProgrammed cell death 6 interacting protein. (882 aa)
tnfsf10TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family. (281 aa)
LOC101169506Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2. (730 aa)
H2M970_ORYLAUbiquitin-like domain-containing protein. (129 aa)
ubcUbiquitin B. (782 aa)
LOC101172365TNF superfamily member 10; Belongs to the tumor necrosis factor family. (280 aa)
chmp2bCharged multivesicular body protein 2Bb. (215 aa)
cflarFLICE-like inhibitory protein; Belongs to the peptidase C14A family. (460 aa)
LOC101167626TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (569 aa)
LOC101171965Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. (104 aa)
LOC101158094Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family. (251 aa)
LOC101160750Protein kinase domain-containing protein. (460 aa)
ripk1Receptor (TNFRSF)-interacting serine-threonine kinase 1, like. (675 aa)
LOC105357520IRF tryptophan pentad repeat domain-containing protein. (257 aa)
LOC101159115Uncharacterized protein. (205 aa)
ogtO-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1. (1038 aa)
LOC101168038Protein kinase domain-containing protein. (509 aa)
LOC101168285Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (415 aa)
ENSORLP00000032097Uncharacterized protein. (189 aa)
LOC101172833Tumor necrosis factor receptor superfamily, member a. (447 aa)
birc7RING-type domain-containing protein. (399 aa)
LOC101169209Uncharacterized protein. (283 aa)
rps27aRibosomal protein S27a. (195 aa)
fasUncharacterized protein. (310 aa)
LOC101166883X-linked inhibitor of apoptosis. (408 aa)
LOC101168687Zgc:153993. (293 aa)
LOC101159737Fas ligand (TNF superfamily, member 6); Belongs to the tumor necrosis factor family. (269 aa)
traddTnfrsf1a-associated via death domain. (321 aa)
stub1STIP1 homology and U-Box containing protein 1. (284 aa)
faddUncharacterized protein. (192 aa)
LOC101157849Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family. (289 aa)
LOC101173230Uncharacterized protein. (340 aa)
prknE3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. (466 aa)
LOC101165110Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. (105 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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