STRINGSTRING
rps27a rps27a spata5l1 spata5l1 psmd14 psmd14 LOC101159283 LOC101159283 psmd5 psmd5 psmc5 psmc5 psmd9 psmd9 psma2 psma2 psme1 psme1 psmb9 psmb9 psmb9-like psmb9-like scube2 scube2 psmd1 psmd1 dhh dhh notum notum psmd6 psmd6 vcp vcp uba52 uba52 LOC101155046 LOC101155046 LOC101166833 LOC101166833 LOC101173089 LOC101173089 psmb2 psmb2 H2M2L4_ORYLA H2M2L4_ORYLA psma3 psma3 psmd7 psmd7 shh shh kxd1 kxd1 psmc3 psmc3 psmb1 psmb1 erlec1 erlec1 disp3 disp3 H2M970_ORYLA H2M970_ORYLA ubc ubc derl2 derl2 LOC101157515 LOC101157515 psme2 psme2 psmc6 psmc6 disp2 disp2 psmc1 psmc1 psma5 psma5 disp1 disp1 psmc4 psmc4 psmf1 psmf1 ccdc13 ccdc13 sel1l sel1l LOC101158678 LOC101158678 LOC101174330 LOC101174330 psme3 psme3 LOC111948194 LOC111948194 psmc2 psmc2 hhat hhat psmd12 psmd12 ENSORLP00000033333 ENSORLP00000033333 psmd10 psmd10 psma8 psma8 psme4 psme4 psmb3 psmb3 LOC111949049 LOC111949049 psmb7 psmb7 hhatl hhatl ENSORLP00000038704 ENSORLP00000038704 LOC101174707 LOC101174707 syvn1 syvn1 LOC100125500 LOC100125500 LOC101164281 LOC101164281 dele1 dele1 gpc5 gpc5 psmd3 psmd3 LOC101162259 LOC101162259 LOC101170338 LOC101170338 psmb8 psmb8 psmd13 psmd13 LOC101157953 LOC101157953 psma1 psma1 psmb4 psmb4 psma4 psma4 os9 os9 LOC101170159 LOC101170159 p4hb p4hb psmd8 psmd8
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rps27aRibosomal protein S27a. (195 aa)
spata5l1Spermatogenesis associated 5-like 1. (752 aa)
psmd14Proteasome 26S subunit, non-ATPase 14. (325 aa)
LOC101159283Si:dkey-24p1.6. (978 aa)
psmd5Proteasome 26S subunit, non-ATPase 5. (524 aa)
psmc5Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family. (406 aa)
psmd9Proteasome 26S subunit, non-ATPase 9. (212 aa)
psma2Proteasome subunit alpha type. (234 aa)
psme1Proteasome activator subunit 1. (250 aa)
psmb9Proteasome subunit beta type-9; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity. This subunit is involved in antigen processing to generate class I binding peptides (By similarity). (216 aa)
psmb9-likeProteasome subunit, beta type 9-like. (217 aa)
scube2Signal peptide, CUB domain, EGF-like 2. (1020 aa)
psmd126S proteasome non-ATPase regulatory subunit 1; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S1 family. (961 aa)
dhhHedgehog protein; Intercellular signal essential for a variety of patterning events during development. (453 aa)
notumNotum, palmitoleoyl-protein carboxylesterase a. (496 aa)
psmd6Proteasome 26S subunit, non-ATPase 6. (389 aa)
vcpValosin containing protein; Belongs to the AAA ATPase family. (814 aa)
uba52Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
LOC101155046Proteasome subunit alpha type. (246 aa)
LOC101166833Hedgehog acyltransferase like, b. (532 aa)
LOC101173089Proteasome 26S subunit, non-ATPase 4b. (376 aa)
psmb2Proteasome subunit beta. (199 aa)
H2M2L4_ORYLABLM10_mid domain-containing protein. (567 aa)
psma3Proteasome subunit alpha type. (255 aa)
psmd7Proteasome 26S subunit, non-ATPase 7. (324 aa)
shhHedgehog protein; Intercellular signal essential for a variety of patterning events during development. (414 aa)
kxd1KxDL motif containing 1. (184 aa)
psmc3Proteasome 26S subunit ATPase 3; Belongs to the AAA ATPase family. (427 aa)
psmb1Proteasome subunit beta. (237 aa)
erlec1Endoplasmic reticulum lectin 1. (477 aa)
disp3Dispatched RND transporter family member 3. (1322 aa)
H2M970_ORYLAUbiquitin-like domain-containing protein. (129 aa)
ubcUbiquitin B. (782 aa)
derl2Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. (239 aa)
LOC101157515Notum pectinacetylesterase 2. (507 aa)
psme2Proteasome activator subunit 2. (241 aa)
psmc6Proteasome 26S subunit, ATPase 6; Belongs to the AAA ATPase family. (389 aa)
disp2Dispatched homolog 2 (Drosophila). (1452 aa)
psmc1Proteasome 26S subunit, ATPase 1b; Belongs to the AAA ATPase family. (443 aa)
psma5Proteasome subunit alpha type. (241 aa)
disp1Dispatched homolog 1 (Drosophila). (1362 aa)
psmc4Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family. (417 aa)
psmf1Uncharacterized protein. (271 aa)
ccdc13Coiled-coil domain containing 13. (605 aa)
sel1lSEL1L adaptor subunit of ERAD E3 ubiquitin ligase. (796 aa)
LOC101158678Proteasome subunit beta. (278 aa)
LOC101174330PCI domain-containing protein. (468 aa)
psme3Proteasome activator subunit 3. (256 aa)
LOC111948194Proteasome subunit beta. (275 aa)
psmc2Proteasome 26S subunit, ATPase 2; Belongs to the AAA ATPase family. (433 aa)
hhatHedgehog acyltransferase; Belongs to the membrane-bound acyltransferase family. (496 aa)
psmd12Proteasome 26S subunit, non-ATPase 12. (457 aa)
ENSORLP00000033333Proteasome subunit beta. (293 aa)
psmd10Proteasome 26S subunit, non-ATPase 10. (226 aa)
psma8Proteasome subunit alpha type. (251 aa)
psme4Proteasome activator subunit 4a. (1848 aa)
psmb3Proteasome subunit beta 3. (223 aa)
LOC111949049Proteasome subunit beta. (276 aa)
psmb7Proteasome subunit beta. (286 aa)
hhatlHedgehog acyltransferase like, a. (553 aa)
ENSORLP00000038704DUF3437 domain-containing protein. (311 aa)
LOC101174707Proteasome 26S subunit, non-ATPase 11b. (422 aa)
syvn1Synovial apoptosis inhibitor 1, synoviolin. (627 aa)
LOC100125500Hedgehog protein; Intercellular signal essential for a variety of patterning events during development. (430 aa)
LOC101164281Protein disulfide-isomerase. (586 aa)
dele1Uncharacterized protein. (516 aa)
gpc5Glypican 5a; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (564 aa)
psmd3Proteasome 26S subunit, non-ATPase 3. (516 aa)
LOC101162259Proteasome endopeptidase complex. (320 aa)
LOC101170338Uncharacterized protein. (1103 aa)
psmb8Proteasome subunit beta. (275 aa)
psmd13Proteasome 26S subunit, non-ATPase 13. (378 aa)
LOC101157953Proteasome 26S subunit, non-ATPase 4a. (372 aa)
psma1Proteasome endopeptidase complex. (238 aa)
psmb4Proteasome subunit beta; Belongs to the peptidase T1B family. (259 aa)
psma4Proteasome subunit alpha type. (261 aa)
os9OS9 endoplasmic reticulum lectin. (669 aa)
LOC101170159Hedgehog protein; Intercellular signal essential for a variety of patterning events during development. (413 aa)
p4hbProtein disulfide-isomerase. (511 aa)
psmd8Proteasome 26S subunit, non-ATPase 8. (265 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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