14 items (Oryzias latipes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101175092	C-type lectin domain-containing protein. (277 aa)
	REL	REL proto-oncogene, NF-kB subunit. (623 aa)
	relb	V-rel avian reticuloendotheliosis viral oncogene homolog B. (533 aa)
	PAK3	Non-specific serine/threonine protein kinase. (590 aa)
	LOC101158728	V-rel avian reticuloendotheliosis viral oncogene homolog A. (617 aa)
	hras	HRas proto-oncogene, GTPase a. (189 aa)
	pak1	Non-specific serine/threonine protein kinase. (571 aa)
	LOC101157019	Tyrosine-protein kinase. (537 aa)
	LOC101154954	Zgc:55558. (189 aa)
	kras	GTPase KRas; Ras proteins bind GDP/GTP and possess intrinsic GTPase activity (By similarity). Plays an important role in the regulation of cell proliferation. (189 aa)
	CSDE1	Cold shock domain containing E1, RNA-binding. (875 aa)
	LOC101169249	Non-specific serine/threonine protein kinase. (514 aa)
	pak2	Non-specific serine/threonine protein kinase. (532 aa)
	LOC101167011	Tyrosine-protein kinase. (526 aa)

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CSDE1	LOC101157019	ENSORLP00000034821	ENSORLP00000029844	Cold shock domain containing E1, RNA-binding.	Tyrosine-protein kinase.	0.429
CSDE1	LOC101167011	ENSORLP00000034821	ENSORLP00000041511	Cold shock domain containing E1, RNA-binding.	Tyrosine-protein kinase.	0.429
CSDE1	LOC101169249	ENSORLP00000034821	ENSORLP00000035392	Cold shock domain containing E1, RNA-binding.	Non-specific serine/threonine protein kinase.	0.427
CSDE1	PAK3	ENSORLP00000034821	ENSORLP00000008803	Cold shock domain containing E1, RNA-binding.	Non-specific serine/threonine protein kinase.	0.427
CSDE1	pak1	ENSORLP00000034821	ENSORLP00000027320	Cold shock domain containing E1, RNA-binding.	Non-specific serine/threonine protein kinase.	0.427
CSDE1	pak2	ENSORLP00000034821	ENSORLP00000039536	Cold shock domain containing E1, RNA-binding.	Non-specific serine/threonine protein kinase.	0.427
LOC101154954	LOC101157019	ENSORLP00000030026	ENSORLP00000029844	Zgc:55558.	Tyrosine-protein kinase.	0.438
LOC101154954	LOC101167011	ENSORLP00000030026	ENSORLP00000041511	Zgc:55558.	Tyrosine-protein kinase.	0.438
LOC101154954	LOC101169249	ENSORLP00000030026	ENSORLP00000035392	Zgc:55558.	Non-specific serine/threonine protein kinase.	0.427
LOC101154954	PAK3	ENSORLP00000030026	ENSORLP00000008803	Zgc:55558.	Non-specific serine/threonine protein kinase.	0.427
LOC101154954	hras	ENSORLP00000030026	ENSORLP00000014318	Zgc:55558.	HRas proto-oncogene, GTPase a.	0.911
LOC101154954	kras	ENSORLP00000030026	ENSORLP00000031976	Zgc:55558.	GTPase KRas; Ras proteins bind GDP/GTP and possess intrinsic GTPase activity (By similarity). Plays an important role in the regulation of cell proliferation.	0.901
LOC101154954	pak1	ENSORLP00000030026	ENSORLP00000027320	Zgc:55558.	Non-specific serine/threonine protein kinase.	0.427
LOC101154954	pak2	ENSORLP00000030026	ENSORLP00000039536	Zgc:55558.	Non-specific serine/threonine protein kinase.	0.427
LOC101157019	CSDE1	ENSORLP00000029844	ENSORLP00000034821	Tyrosine-protein kinase.	Cold shock domain containing E1, RNA-binding.	0.429
LOC101157019	LOC101154954	ENSORLP00000029844	ENSORLP00000030026	Tyrosine-protein kinase.	Zgc:55558.	0.438
LOC101157019	LOC101167011	ENSORLP00000029844	ENSORLP00000041511	Tyrosine-protein kinase.	Tyrosine-protein kinase.	0.901
LOC101157019	LOC101169249	ENSORLP00000029844	ENSORLP00000035392	Tyrosine-protein kinase.	Non-specific serine/threonine protein kinase.	0.422
LOC101157019	PAK3	ENSORLP00000029844	ENSORLP00000008803	Tyrosine-protein kinase.	Non-specific serine/threonine protein kinase.	0.445
LOC101157019	hras	ENSORLP00000029844	ENSORLP00000014318	Tyrosine-protein kinase.	HRas proto-oncogene, GTPase a.	0.505