70 items (Oryzias latipes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SPRED2	Sprouty related EVH1 domain containing 2. (464 aa)
	psmd14	Proteasome 26S subunit, non-ATPase 14. (325 aa)
	rasa3	RAS p21 protein activator 3. (833 aa)
	psmd5	Proteasome 26S subunit, non-ATPase 5. (524 aa)
	psmc5	Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family. (406 aa)
	psmd9	Proteasome 26S subunit, non-ATPase 9. (212 aa)
	psma2	Proteasome subunit alpha type. (234 aa)
	psme1	Proteasome activator subunit 1. (250 aa)
	psmb9	Proteasome subunit beta type-9; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity. This subunit is involved in antigen processing to generate class I binding peptides (By similarity). (216 aa)
	psmb9-like	Proteasome subunit, beta type 9-like. (217 aa)
	psmd1	26S proteasome non-ATPase regulatory subunit 1; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S1 family. (961 aa)
	psmd6	Proteasome 26S subunit, non-ATPase 6. (389 aa)
	LOC101173089	Proteasome 26S subunit, non-ATPase 4b. (376 aa)
	psmb2	Proteasome subunit beta. (199 aa)
	rasa1	RAS p21 protein activator (GTPase activating protein) 1a. (1055 aa)
	H2M2L4_ORYLA	BLM10_mid domain-containing protein. (567 aa)
	psma3	Proteasome subunit alpha type. (255 aa)
	kxd1	KxDL motif containing 1. (184 aa)
	psmb1	Proteasome subunit beta. (237 aa)
	LOC101172920	CULLIN_2 domain-containing protein; Belongs to the cullin family. (746 aa)
	hras	HRas proto-oncogene, GTPase a. (189 aa)
	LOC101169820	Kelch repeat and BTB (POZ) domain containing 7. (618 aa)
	RASA2	Uncharacterized protein. (828 aa)
	ubc	Ubiquitin B. (782 aa)
	RASAL1	RAS protein activator like 1. (759 aa)
	psme2	Proteasome activator subunit 2. (241 aa)
	H2MJT0_ORYLA	Uncharacterized protein. (589 aa)
	psmc6	Proteasome 26S subunit, ATPase 6; Belongs to the AAA ATPase family. (389 aa)
	psmc1	Proteasome 26S subunit, ATPase 1b; Belongs to the AAA ATPase family. (443 aa)
	psma5	Proteasome subunit alpha type. (241 aa)
	psmc4	Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family. (417 aa)
	psmf1	Uncharacterized protein. (271 aa)
	LOC101175325	Uncharacterized protein. (1052 aa)
	LOC101158678	Proteasome subunit beta. (278 aa)
	LOC101174330	PCI domain-containing protein. (468 aa)
	Nf1	Uncharacterized protein. (506 aa)
	LOC111948194	Proteasome subunit beta. (275 aa)
	spred1	Sprouty related EVH1 domain containing 1. (542 aa)
	psmc2	Proteasome 26S subunit, ATPase 2; Belongs to the AAA ATPase family. (433 aa)
	LOC101154954	Zgc:55558. (189 aa)
	ENSORLP00000030068	Uncharacterized protein. (150 aa)
	kras	GTPase KRas; Ras proteins bind GDP/GTP and possess intrinsic GTPase activity (By similarity). Plays an important role in the regulation of cell proliferation. (189 aa)
	psmd12	Proteasome 26S subunit, non-ATPase 12. (457 aa)
	ENSORLP00000033333	Proteasome subunit beta. (293 aa)
	psmd10	Proteasome 26S subunit, non-ATPase 10. (226 aa)
	LOC101163690	Synaptic Ras GTPase activating protein 1b. (1477 aa)
	CSDE1	Cold shock domain containing E1, RNA-binding. (875 aa)
	psma8	Proteasome subunit alpha type. (251 aa)
	psme4	Proteasome activator subunit 4a. (1848 aa)
	psmb3	Proteasome subunit beta 3. (223 aa)
	rasal2	RAS protein activator like 2. (1281 aa)
	LOC101156944	RAS protein activator like 3. (1276 aa)
	CUL3	Cullin 3; Belongs to the cullin family. (766 aa)
	LOC111949049	Proteasome subunit beta. (276 aa)
	psmb7	Proteasome subunit beta. (286 aa)
	LOC105358735	Sprouty related EVH1 domain containing 2a. (430 aa)
	ENSORLP00000038704	DUF3437 domain-containing protein. (311 aa)
	LOC101174707	Proteasome 26S subunit, non-ATPase 11b. (422 aa)
	LOC101160492	Uncharacterized protein. (1263 aa)
	dab2ip	DAB2 interacting protein b. (1253 aa)
	psmd3	Proteasome 26S subunit, non-ATPase 3. (516 aa)
	LOC101162259	Proteasome endopeptidase complex. (320 aa)
	psmb8	Proteasome subunit beta. (275 aa)
	psmd13	Proteasome 26S subunit, non-ATPase 13. (378 aa)
	LOC101157953	Proteasome 26S subunit, non-ATPase 4a. (372 aa)
	psma1	Proteasome endopeptidase complex. (238 aa)
	psmb4	Proteasome subunit beta; Belongs to the peptidase T1B family. (259 aa)
	psma4	Proteasome subunit alpha type. (261 aa)
	psmd8	Proteasome 26S subunit, non-ATPase 8. (265 aa)
	spred3	Sprouty related EVH1 domain containing 3. (287 aa)

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CSDE1	ENSORLP00000030068	ENSORLP00000034821	ENSORLP00000030068	Cold shock domain containing E1, RNA-binding.	Uncharacterized protein.	0.406
CSDE1	H2MJT0_ORYLA	ENSORLP00000034821	ENSORLP00000018929	Cold shock domain containing E1, RNA-binding.	Uncharacterized protein.	0.743
CSDE1	LOC101156944	ENSORLP00000034821	ENSORLP00000037151	Cold shock domain containing E1, RNA-binding.	RAS protein activator like 3.	0.429
CSDE1	LOC101160492	ENSORLP00000034821	ENSORLP00000042744	Cold shock domain containing E1, RNA-binding.	Uncharacterized protein.	0.429
CSDE1	LOC101163690	ENSORLP00000034821	ENSORLP00000034184	Cold shock domain containing E1, RNA-binding.	Synaptic Ras GTPase activating protein 1b.	0.429
CSDE1	LOC101175325	ENSORLP00000034821	ENSORLP00000022034	Cold shock domain containing E1, RNA-binding.	Uncharacterized protein.	0.429
CSDE1	LOC105358735	ENSORLP00000034821	ENSORLP00000038410	Cold shock domain containing E1, RNA-binding.	Sprouty related EVH1 domain containing 2a.	0.552
CSDE1	Nf1	ENSORLP00000034821	ENSORLP00000026133	Cold shock domain containing E1, RNA-binding.	Uncharacterized protein.	0.743
CSDE1	RASA2	ENSORLP00000034821	ENSORLP00000014603	Cold shock domain containing E1, RNA-binding.	Uncharacterized protein.	0.523
CSDE1	RASAL1	ENSORLP00000034821	ENSORLP00000016456	Cold shock domain containing E1, RNA-binding.	RAS protein activator like 1.	0.512
CSDE1	SPRED2	ENSORLP00000034821	ENSORLP00000003022	Cold shock domain containing E1, RNA-binding.	Sprouty related EVH1 domain containing 2.	0.552
CSDE1	dab2ip	ENSORLP00000034821	ENSORLP00000043830	Cold shock domain containing E1, RNA-binding.	DAB2 interacting protein b.	0.429
CSDE1	rasa1	ENSORLP00000034821	ENSORLP00000012485	Cold shock domain containing E1, RNA-binding.	RAS p21 protein activator (GTPase activating protein) 1a.	0.813
CSDE1	rasa3	ENSORLP00000034821	ENSORLP00000006141	Cold shock domain containing E1, RNA-binding.	RAS p21 protein activator 3.	0.523
CSDE1	rasal2	ENSORLP00000034821	ENSORLP00000036667	Cold shock domain containing E1, RNA-binding.	RAS protein activator like 2.	0.429
CSDE1	spred1	ENSORLP00000034821	ENSORLP00000028048	Cold shock domain containing E1, RNA-binding.	Sprouty related EVH1 domain containing 1.	0.552
CSDE1	spred3	ENSORLP00000034821	ENSORLP00000002839	Cold shock domain containing E1, RNA-binding.	Sprouty related EVH1 domain containing 3.	0.406
CSDE1	ubc	ENSORLP00000034821	ENSORLP00000015065	Cold shock domain containing E1, RNA-binding.	Ubiquitin B.	0.539
CUL3	ENSORLP00000033333	ENSORLP00000037210	ENSORLP00000033333	Cullin 3; Belongs to the cullin family.	Proteasome subunit beta.	0.480
CUL3	ENSORLP00000038704	ENSORLP00000037210	ENSORLP00000038704	Cullin 3; Belongs to the cullin family.	DUF3437 domain-containing protein.	0.452