59 items (Oryzias latipes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101172864	Uncharacterized protein. (255 aa)
	ksr1	Kinase suppressor of ras 1a. (978 aa)
	LOC101171247	RAP1A, member of RAS oncogene family a. (202 aa)
	LOC101155777	Uncharacterized protein. (372 aa)
	APBB1IP	Uncharacterized protein. (437 aa)
	LOC105354202	SEFIR domain-containing protein. (585 aa)
	PEBP4	Phosphatidylethanolamine binding protein 4. (156 aa)
	lamtor2	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2. (190 aa)
	mark3	Non-specific serine/threonine protein kinase. (750 aa)
	fndc3a	Fibronectin type III domain containing 3A. (1244 aa)
	LOC101172101	Vinculin a. (1135 aa)
	LOC101162905	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (369 aa)
	LOC101162646	SEFIR domain-containing protein. (742 aa)
	LOC101165528	Uncharacterized protein. (526 aa)
	ENSORLP00000037708	annotation not available (611 aa)
	CSK	Tyrosine-protein kinase. (450 aa)
	LOC101164480	Tyrosine-protein kinase. (551 aa)
	wdr83	WD repeat domain containing 83. (317 aa)
	ksr2	Kinase suppressor of ras 2. (960 aa)
	braf	B-Raf proto-oncogene, serine/threonine kinase. (823 aa)
	CSDE1	Cold shock domain containing E1, RNA-binding. (875 aa)
	arrb2	Arrestin, beta 2a. (408 aa)
	kras	GTPase KRas; Ras proteins bind GDP/GTP and possess intrinsic GTPase activity (By similarity). Plays an important role in the regulation of cell proliferation. (189 aa)
	pebp1	Phosphatidylethanolamine binding protein 1. (266 aa)
	LOC101154954	Zgc:55558. (189 aa)
	cnksr2	Connector enhancer of kinase suppressor of Ras 2a. (941 aa)
	arrb1	Arrestin, beta 1. (443 aa)
	fn1	Fibronectin-1. (2503 aa)
	lamtor3	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 3. (132 aa)
	il17rd	Interleukin 17 receptor D. (809 aa)
	LOC101157335	Uncharacterized protein. (1009 aa)
	LOC101155523	Uncharacterized protein. (375 aa)
	LOC101173070	Uncharacterized protein. (369 aa)
	LOC101169951	Uncharacterized protein. (330 aa)
	araf	A-Raf proto-oncogene, serine/threonine kinase. (607 aa)
	cnksr1	Connector enhancer of kinase suppressor of Ras 1. (830 aa)
	tln1	Talin 1. (2541 aa)
	apbb1ip	Amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein. (662 aa)
	LOC101173776	Talin 2a. (2542 aa)
	LOC101159747	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (389 aa)
	fndc3b	Fibronectin type III domain containing 3Ba. (1209 aa)
	raf1	Raf-1 proto-oncogene, serine/threonine kinase a. (677 aa)
	hras	HRas proto-oncogene, GTPase a. (189 aa)
	LOC101168921	Actin, cytoplasmic 1, N-terminally processed; Actin is a highly conserved protein that polymerizes to produce filaments that form cross-linked networks in the cytoplasm of cells. Actin exists in both monomeric (G-actin) and polymeric (F-actin) forms, both forms playing key functions, such as cell motility and contraction. In addition to their role in the cytoplasmic cytoskeleton, G- and F-actin also localize in the nucleus, and regulate gene transcription and motility and repair of damaged DNA. (410 aa)
	vcl	Vinculin b. (1066 aa)
	LOC101174439	Si:ch211-26b3.4. (1092 aa)
	LOC101167472	Connector enhancer of kinase suppressor of Ras 2b. (956 aa)
	tln2	Talin 2b. (2405 aa)
	map2k1	Mitogen-activated protein kinase kinase 1; Belongs to the protein kinase superfamily. (394 aa)
	SRC	Tyrosine-protein kinase. (544 aa)
	LOC101167529	RAP1A, member of RAS oncogene family b. (185 aa)
	LOC101163063	Ras association (RalGDS/AF-6) and pleckstrin homology domains 1b. (1438 aa)
	map2k2	Mitogen-activated protein kinase kinase 2a; Belongs to the protein kinase superfamily. (397 aa)
	LOC101158271	Tyrosine-protein kinase. (447 aa)
	itgb3	Integrin beta; Belongs to the integrin beta chain family. (795 aa)
	LOC101168465	Integrin beta; Belongs to the integrin beta chain family. (754 aa)
	fgb	Fibrinogen beta chain. (498 aa)
	fga	Fibrinogen alpha chain. (750 aa)
	LOC101156324	Si:ch211-207e14.4. (594 aa)

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APBB1IP	CSDE1	ENSORLP00000041812	ENSORLP00000034821	Uncharacterized protein.	Cold shock domain containing E1, RNA-binding.	0.472
APBB1IP	CSK	ENSORLP00000041812	ENSORLP00000036813	Uncharacterized protein.	Tyrosine-protein kinase.	0.481
APBB1IP	LOC101154954	ENSORLP00000041812	ENSORLP00000030026	Uncharacterized protein.	Zgc:55558.	0.472
APBB1IP	LOC101158271	ENSORLP00000041812	ENSORLP00000006130	Uncharacterized protein.	Tyrosine-protein kinase.	0.481
APBB1IP	LOC101167529	ENSORLP00000041812	ENSORLP00000007312	Uncharacterized protein.	RAP1A, member of RAS oncogene family b.	0.765
APBB1IP	LOC101171247	ENSORLP00000041812	ENSORLP00000042612	Uncharacterized protein.	RAP1A, member of RAS oncogene family a.	0.765
APBB1IP	LOC101172101	ENSORLP00000041812	ENSORLP00000039945	Uncharacterized protein.	Vinculin a.	0.569
APBB1IP	LOC101172864	ENSORLP00000041812	ENSORLP00000021855	Uncharacterized protein.	Uncharacterized protein.	0.765
APBB1IP	LOC101173776	ENSORLP00000041812	ENSORLP00000015376	Uncharacterized protein.	Talin 2a.	0.774
APBB1IP	PEBP4	ENSORLP00000041812	ENSORLP00000041099	Uncharacterized protein.	Phosphatidylethanolamine binding protein 4.	0.558
APBB1IP	araf	ENSORLP00000041812	ENSORLP00000020929	Uncharacterized protein.	A-Raf proto-oncogene, serine/threonine kinase.	0.511
APBB1IP	braf	ENSORLP00000041812	ENSORLP00000035095	Uncharacterized protein.	B-Raf proto-oncogene, serine/threonine kinase.	0.511
APBB1IP	hras	ENSORLP00000041812	ENSORLP00000014318	Uncharacterized protein.	HRas proto-oncogene, GTPase a.	0.472
APBB1IP	kras	ENSORLP00000041812	ENSORLP00000031976	Uncharacterized protein.	GTPase KRas; Ras proteins bind GDP/GTP and possess intrinsic GTPase activity (By similarity). Plays an important role in the regulation of cell proliferation.	0.472
APBB1IP	ksr1	ENSORLP00000041812	ENSORLP00000045143	Uncharacterized protein.	Kinase suppressor of ras 1a.	0.492
APBB1IP	ksr2	ENSORLP00000041812	ENSORLP00000035598	Uncharacterized protein.	Kinase suppressor of ras 2.	0.499
APBB1IP	map2k1	ENSORLP00000041812	ENSORLP00000008701	Uncharacterized protein.	Mitogen-activated protein kinase kinase 1; Belongs to the protein kinase superfamily.	0.490
APBB1IP	map2k2	ENSORLP00000041812	ENSORLP00000006223	Uncharacterized protein.	Mitogen-activated protein kinase kinase 2a; Belongs to the protein kinase superfamily.	0.490
APBB1IP	pebp1	ENSORLP00000041812	ENSORLP00000031933	Uncharacterized protein.	Phosphatidylethanolamine binding protein 1.	0.526
APBB1IP	raf1	ENSORLP00000041812	ENSORLP00000014365	Uncharacterized protein.	Raf-1 proto-oncogene, serine/threonine kinase a.	0.511