69 items (Oryzias latipes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101165662	Slingshot protein phosphatase 2b. (1266 aa)
	brap	BRCA1 associated protein. (530 aa)
	ppp2ca	Serine/threonine-protein phosphatase. (309 aa)
	ppp5c	Serine/threonine-protein phosphatase. (491 aa)
	LOC101157459	Dual specificity phosphatase 2. (315 aa)
	dusp7	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (384 aa)
	map2k2	Mitogen-activated protein kinase kinase 2a; Belongs to the protein kinase superfamily. (397 aa)
	ppp2r5b	Serine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit. (520 aa)
	dusp1	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (361 aa)
	dusp28	Dual specificity phosphatase 28. (146 aa)
	ppp4r1	WRNPLPNID domain-containing protein. (969 aa)
	map2k1	Mitogen-activated protein kinase kinase 1; Belongs to the protein kinase superfamily. (394 aa)
	LOC101167061	Protein phosphatase 2, regulatory subunit A, beta b. (589 aa)
	uba52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
	LOC101154993	Mitogen-activated protein kinase. (368 aa)
	ptpn3	Protein tyrosine phosphatase non-receptor type 3. (873 aa)
	LOC101173884	Dual specificity protein phosphatase; Dual specificity phosphatase able to dephosphorylate phosphotyrosine, phosphoserine and phosphothreonine residues, with a preference for phosphotyrosine as a substrate. Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (184 aa)
	kxd1	KxDL motif containing 1. (184 aa)
	dusp4	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (372 aa)
	PAQR3	Progestin and adipoQ receptor family member IIIb. (315 aa)
	hras	HRas proto-oncogene, GTPase a. (189 aa)
	raf1	Raf-1 proto-oncogene, serine/threonine kinase a. (677 aa)
	LOC101175078	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (359 aa)
	LOC101159747	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (389 aa)
	H2M970_ORYLA	Ubiquitin-like domain-containing protein. (129 aa)
	ubc	Ubiquitin B. (782 aa)
	dusp10	Dual specificity phosphatase 10; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (472 aa)
	ppp2r5a	Serine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit. (509 aa)
	dusp22	Uncharacterized protein; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (199 aa)
	LOC101168659	Dual specificity phosphatase 19a. (207 aa)
	dusp12	Dual specificity phosphatase 12. (299 aa)
	LOC101173727	Slingshot protein phosphatase 2a. (1266 aa)
	dusp5	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (376 aa)
	LOC101159668	Mitogen-activated protein kinase. (361 aa)
	fnbp4	Formin binding protein 4. (843 aa)
	araf	A-Raf proto-oncogene, serine/threonine kinase. (607 aa)
	ptprr	Protein tyrosine phosphatase receptor type R. (604 aa)
	paqr3	Progestin and adipoQ receptor family member IIIa. (310 aa)
	LOC101173107	Serine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit. (478 aa)
	H2MVE2_ORYLA	Protein phosphatase 4, regulatory subunit 4. (726 aa)
	dusp6	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (384 aa)
	LOC101169753	Serine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit. (609 aa)
	ptpn7	Uncharacterized protein. (459 aa)
	ppp2cb	Serine/threonine-protein phosphatase. (309 aa)
	LOC101154954	Zgc:55558. (189 aa)
	mob2	MOB kinase activator 2a. (249 aa)
	dusp16	Dual specificity phosphatase 16. (611 aa)
	pebp1	Phosphatidylethanolamine binding protein 1. (266 aa)
	kras	GTPase KRas; Ras proteins bind GDP/GTP and possess intrinsic GTPase activity (By similarity). Plays an important role in the regulation of cell proliferation. (189 aa)
	styx	Serine/threonine/tyrosine interacting protein. (223 aa)
	LOC101161425	Slingshot protein phosphatase 1b. (660 aa)
	LOC101169592	Dual specificity phosphatase 19b. (208 aa)
	CSDE1	Cold shock domain containing E1, RNA-binding. (875 aa)
	braf	B-Raf proto-oncogene, serine/threonine kinase. (823 aa)
	LOC101166327	Si:dkey-175m17.7. (881 aa)
	ppp2r5d	Serine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit. (597 aa)
	ENSORLP00000036899	Uncharacterized protein. (151 aa)
	ssh1	Slingshot protein phosphatase 1a. (1019 aa)
	ENSORLP00000037708	annotation not available (611 aa)
	rps27a	Ribosomal protein S27a. (195 aa)
	relch	RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing. (1209 aa)
	LOC101162905	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (369 aa)
	ssh3	Si:ch211-203d1.3. (610 aa)
	LOC101167990-2	Dual specificity phosphatase 22b. (207 aa)
	PPP2R5C	Serine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit. (567 aa)
	mark3	Non-specific serine/threonine protein kinase. (750 aa)
	LOC101160226	Dual specificity phosphatase 22a. (181 aa)
	PEBP4	Phosphatidylethanolamine binding protein 4. (156 aa)
	dusp8	Dual specificity phosphatase 8a. (651 aa)

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CSDE1	H2M970_ORYLA	ENSORLP00000034821	ENSORLP00000015051	Cold shock domain containing E1, RNA-binding.	Ubiquitin-like domain-containing protein.	0.456
CSDE1	LOC101159747	ENSORLP00000034821	ENSORLP00000015020	Cold shock domain containing E1, RNA-binding.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.459
CSDE1	LOC101162905	ENSORLP00000034821	ENSORLP00000039541	Cold shock domain containing E1, RNA-binding.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.459
CSDE1	LOC101167061	ENSORLP00000034821	ENSORLP00000009339	Cold shock domain containing E1, RNA-binding.	Protein phosphatase 2, regulatory subunit A, beta b.	0.454
CSDE1	PEBP4	ENSORLP00000034821	ENSORLP00000041099	Cold shock domain containing E1, RNA-binding.	Phosphatidylethanolamine binding protein 4.	0.502
CSDE1	araf	ENSORLP00000034821	ENSORLP00000020929	Cold shock domain containing E1, RNA-binding.	A-Raf proto-oncogene, serine/threonine kinase.	0.775
CSDE1	braf	ENSORLP00000034821	ENSORLP00000035095	Cold shock domain containing E1, RNA-binding.	B-Raf proto-oncogene, serine/threonine kinase.	0.775
CSDE1	brap	ENSORLP00000034821	ENSORLP00000000644	Cold shock domain containing E1, RNA-binding.	BRCA1 associated protein.	0.521
CSDE1	map2k1	ENSORLP00000034821	ENSORLP00000008701	Cold shock domain containing E1, RNA-binding.	Mitogen-activated protein kinase kinase 1; Belongs to the protein kinase superfamily.	0.600
CSDE1	map2k2	ENSORLP00000034821	ENSORLP00000006223	Cold shock domain containing E1, RNA-binding.	Mitogen-activated protein kinase kinase 2a; Belongs to the protein kinase superfamily.	0.600
CSDE1	pebp1	ENSORLP00000034821	ENSORLP00000031933	Cold shock domain containing E1, RNA-binding.	Phosphatidylethanolamine binding protein 1.	0.519
CSDE1	ppp2ca	ENSORLP00000034821	ENSORLP00000001162	Cold shock domain containing E1, RNA-binding.	Serine/threonine-protein phosphatase.	0.430
CSDE1	ppp2cb	ENSORLP00000034821	ENSORLP00000027862	Cold shock domain containing E1, RNA-binding.	Serine/threonine-protein phosphatase.	0.430
CSDE1	ppp5c	ENSORLP00000034821	ENSORLP00000001596	Cold shock domain containing E1, RNA-binding.	Serine/threonine-protein phosphatase.	0.404
CSDE1	raf1	ENSORLP00000034821	ENSORLP00000014365	Cold shock domain containing E1, RNA-binding.	Raf-1 proto-oncogene, serine/threonine kinase a.	0.775
CSDE1	rps27a	ENSORLP00000034821	ENSORLP00000038189	Cold shock domain containing E1, RNA-binding.	Ribosomal protein S27a.	0.481
CSDE1	uba52	ENSORLP00000034821	ENSORLP00000010731	Cold shock domain containing E1, RNA-binding.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.456
CSDE1	ubc	ENSORLP00000034821	ENSORLP00000015065	Cold shock domain containing E1, RNA-binding.	Ubiquitin B.	0.539
ENSORLP00000036899	LOC101154993	ENSORLP00000036899	ENSORLP00000011305	Uncharacterized protein.	Mitogen-activated protein kinase.	0.504
ENSORLP00000036899	LOC101159668	ENSORLP00000036899	ENSORLP00000020405	Uncharacterized protein.	Mitogen-activated protein kinase.	0.504